RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GPRIN3Q6ZVF9 776 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 SLC22A9Q8IVM8 553 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 CLYBLQ8N0X4 340 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 CEP112Q8N8E3 955 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 GBP7Q8N8V2 638 aaPredicted RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 ACMSDQ8TDX5 336 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 EPS8L3Q8TE67 593 aaKnown RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 HGDQ93099 445 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 L3HYPDHQ96EM0 354 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 HSPBAP1Q96EW2 488 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 C11orf24Q96F05 449 aaPredicted RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 TMEM41AQ96HV5 264 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 LCORQ96JN0 433 aaPredicted RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 ITPAQ9BY32 194 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 ACPTQ9BZG2 426 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 EPB41L4BQ9H329 900 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 NEUROD4Q9HD90 331 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 HEY2Q9UBP5 337 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 KCNN3Q9UGI6 736 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 FETUBQ9UGM5 382 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 BCAP29Q9UHQ4 241 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 MCM8Q9UJA3 840 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 ITGB1BP2Q9UKP3 347 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 UTS2RQ9UKP6 389 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 DLGAP4Q9Y2H0 992 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.89□□□□□ -0.99
VPS41-201ENST00000265745 C15orf41Q9Y2V0 281 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 PLLPQ9Y342 182 aa8.89□□□□□ -0.99
VPS41-201ENST00000265745 HSPB2A8KAH6 182 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 GOLGA8RI6L899 631 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 SYT5O00445 386 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 TO15178 435 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ICOSLGO75144 302 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ESRRBO95718 433 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 GSTA1P08263 222 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 KRT15P19012 456 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 PTPN6P29350 595 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 CEACAM8P31997 349 aaPredicted RBP8.88□□□□□ -0.99
VPS41-201ENST00000265745 TIMP3P35625 211 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 PTGDSP41222 190 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 MASP1P48740 699 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 PKNOX1P55347 436 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 DCAF7P61962 342 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 MRPS35P82673 323 aaKnown RBP8.88□□□□□ -0.99
VPS41-201ENST00000265745 HMGCS1Q01581 520 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 SNTA1Q13424 505 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 HSPB2Q16082 182 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 NNATQ16517 81 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ACSF3Q4G176 576 aaPredicted RBP8.88□□□□□ -0.99
VPS41-201ENST00000265745 EIPR1Q53HC9 387 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ZNF628Q5EBL2 1059 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 NHSL2Q5HYW2 709 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 CES4AQ5XG92 561 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 SLC30A6Q6NXT4 461 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 GALNT18Q6P9A2 607 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 WDR53Q7Z5U6 358 aaPredicted RBP8.88□□□□□ -0.99
VPS41-201ENST00000265745 CDH24Q86UP0 819 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 CNPY4Q8N129 248 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 OR52R1Q8NGF1 315 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 OR1J4Q8NGS1 313 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ZNF675Q8TD23 568 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 MZB1Q8WU39 189 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ERP27Q96DN0 273 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 OMA1Q96E52 524 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 APIPQ96GX9 242 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 NODALQ96S42 347 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 ZNF559Q9BR84 538 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 PRDM14Q9GZV8 571 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 C12orf49Q9H741 205 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 METTL7AQ9H8H3 244 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 PRODH2Q9UF12 536 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 DCDC2Q9UHG0 476 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 GPR55Q9Y2T6 319 aaPredicted RBP8.88□□□□□ -0.99
VPS41-201ENST00000265745 SLC6A5Q9Y345 797 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 L3MBTL1Q9Y468 752 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 TIMM22Q9Y584 194 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 DNAJC13O75165 2243 aa8.88□□□□□ -0.99
VPS41-201ENST00000265745 F8P00451 2351 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 GNG14A0A1W2PPG7 69 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 FRG2CA6NGY1 282 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 KDM4EB2RXH2 506 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 G3V2L1 256 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 UBFD1O14562 309 aaKnown RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 GNB5O14775 395 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 PCDH7O60245 1069 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 UGT2B11O75310 529 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ENO1P06733 434 aaKnown RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 IL3P08700 152 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 RHOXF2BP0C7M4 288 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 CT45A8P0DMV1 189 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 CT45A9P0DMV2 189 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 BMP7P18075 431 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 HMOX2P30519 316 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 HTR6P50406 440 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 NAGLUP54802 743 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ACSM2AQ08AH3 577 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 PLCXD2Q0VAA5 305 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 MYBPHQ13203 477 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 HEPACAMQ14CZ8 416 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms