RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 C6orf120Q7Z4R8 191 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 CDRT4Q8N9R6 151 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 OR4A15Q8NGL6 344 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 FAM110BQ8TC76 370 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 BRIX1Q8TDN6 353 aaKnown RBP13.21□□□□□ -0.29
SSBP1-201ENST00000265304 DOK4Q8TEW6 326 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 NTNG2Q96CW9 530 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 CMTM5Q96DZ9 223 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 STACQ99469 402 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 ANKRA2Q9H9E1 313 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 FOLH1BQ9HBA9 442 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 DUSP22Q9NRW4 184 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 ZCCHC3Q9NUD5 404 aaKnown RBP13.21□□□□□ -0.29
SSBP1-201ENST00000265304 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 YARS2Q9Y2Z4 477 aaKnown RBP13.21□□□□□ -0.29
SSBP1-201ENST00000265304 FAM208BQ5VWN6 2430 aa13.21□□□□□ -0.3
SSBP1-201ENST00000265304 FRG2CA6NGY1 282 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 FXYD1O00168 92 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 ANGPT2O15123 496 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 ASNA1O43681 348 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 CPSF4O95639 269 aaKnown RBP13.2□□□□□ -0.3
SSBP1-201ENST00000265304 KRT16P08779 473 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 GPX2P18283 190 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 ITGA3P26006 1051 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 CCL11P51671 97 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 MFAP5Q13361 173 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 RUNDC3AQ59EK9 446 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 AGAP7PQ5VUJ5 663 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 SNX32Q86XE0 403 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 DND1Q8IYX4 353 aaKnown RBP13.2□□□□□ -0.3
SSBP1-201ENST00000265304 FDCSPQ8NFU4 85 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 HAS2Q92819 552 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 LCORQ96JN0 433 aaPredicted RBP13.2□□□□□ -0.3
SSBP1-201ENST00000265304 AGAP4Q96P64 663 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 NXF5Q9H1B4 397 aaKnown RBP13.2□□□□□ -0.3
SSBP1-201ENST00000265304 PIGUQ9H490 435 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 SERHL2Q9H4I8 314 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 WDR70Q9NW82 654 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 GPR83Q9NYM4 423 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 VAPAQ9P0L0 249 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
SSBP1-201ENST00000265304 RP1L1Q8IWN7 2480 aaPredicted RBP13.19□□□□□ -0.3
SSBP1-201ENST00000265304 PCNX3Q9H6A9 2034 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 ZNF354AO60765 605 aaPredicted RBP13.19□□□□□ -0.3
SSBP1-201ENST00000265304 KRT34O76011 436 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 KCNH1O95259 989 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 KRT75O95678 551 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 PPIBP23284 216 aaKnown RBP13.19□□□□□ -0.3
SSBP1-201ENST00000265304 PRIM2P49643 509 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 ST3GAL2Q16842 350 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
SSBP1-201ENST00000265304 HEPHL1Q6MZM0 1159 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 C6orf89Q6UWU4 347 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 NPSR1Q6W5P4 371 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 ZNF621Q6ZSS3 439 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 GPALPP1Q8IXQ4 340 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 SLC16A11Q8NCK7 471 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 RNF138Q8WVD3 245 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 ANKRD27Q96NW4 1050 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 RASL10BQ96S79 203 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 CGREF1Q99674 301 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 GPATCH1Q9BRR8 931 aaKnown RBP13.19□□□□□ -0.3
SSBP1-201ENST00000265304 SLC35A5Q9BS91 424 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 CDCP1Q9H5V8 836 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 TPT1P8Q9HAU6 139 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 BOD1L1Q8NFC6 3051 aa13.19□□□□□ -0.3
SSBP1-201ENST00000265304 MKRN2OSH3BPM6 223 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 CLIC1O00299 241 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 MAN1A2O60476 641 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 ITGA10O75578 1167 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 C1QCP02747 245 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 GSNP06396 782 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 FBXO45P0C2W1 286 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 T-ENOLP0DO92 83 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 ACP2P11117 423 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 LCN1P31025 176 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 HLCSP50747 726 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 POLE2P56282 527 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 FADDQ13158 208 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 ZNF791Q3KP31 576 aaPredicted RBP13.18□□□□□ -0.3
SSBP1-201ENST00000265304 C6orf10Q5SRN2 563 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 B3GNTL1Q67FW5 361 aaPredicted RBP13.18□□□□□ -0.3
SSBP1-201ENST00000265304 TMEM81Q6P7N7 255 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 TRPM8Q7Z2W7 1104 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 ZNF227Q86WZ6 799 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 CHDHQ8NE62 594 aaPredicted RBP13.18□□□□□ -0.3
SSBP1-201ENST00000265304 OR52N2Q8NGI0 321 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms