RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZNF175Q9Y473 711 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 UBFD1O14562 309 aaKnown RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 EPHA1P21709 976 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 PBX2P40425 430 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 PITPNBP48739 271 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 KIF18BQ86Y91 864 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 OR5H2Q8NGV7 314 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TSACCQ96A04 125 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 MYRFLQ96LU7 910 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 LIPT1Q9Y234 373 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 JMJD7P0C870 316 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SOX3P41225 446 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ARRB1P49407 418 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ARSDP51689 593 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 RNASE10Q5GAN6 216 aaKnown RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 NRMQ8IXM6 262 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TEX26Q8N6G2 289 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 CSNK1A1LQ8N752 337 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 CIDECQ96AQ7 238 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SLC41A3Q96GZ6 507 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF559Q9BR84 538 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 DNAJC15Q9Y5T4 150 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TMEM14AQ9Y6G1 99 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 NAV1Q8NEY1 1877 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ATE1O95260 518 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SSTR4P31391 388 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 IGFN1Q86VF2 1251 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 OR5AK2Q8NH90 309 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 CREB3L4Q8TEY5 395 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SORCS1Q8WY21 1168 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ZDHHC12Q96GR4 267 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 HS6ST2Q96MM7 605 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 DNMT3AQ9Y6K1 912 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 A0A0G2JMP0 313 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 F8W036 122 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 K7ERQ8 282 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 LCKP06239 509 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 ALDH3B2P48448 385 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 BLOC1S1P78537 153 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 DHCR24Q15392 516 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 BATFQ16520 125 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 PCGF3Q3KNV8 242 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 GTPBP8Q8N3Z3 284 aaPredicted RBP17.1■□□□□ 0.33
COL5A3-201ENST00000264828 OR4M2Q8NGB6 313 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 RANBP9Q96S59 729 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 DNTTIP1Q9H147 329 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 TP53I11O14683 189 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 FXYD4P59646 89 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 TMEM130Q8N3G9 435 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 C16orf78Q8WTQ4 265 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 RPH3AQ9Y2J0 694 aaPredicted RBP17.1■□□□□ 0.33
COL5A3-201ENST00000264828 TRAV18A0A075B6X5 111 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 A0A0U1RQK1 487 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF487B1APH4 448 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 SEC14L5O43304 696 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 RNGTTO60942 597 aaKnown RBP17.1■□□□□ 0.33
COL5A3-201ENST00000264828 KNG1P01042 644 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 SOD2P04179 222 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 PPP5CP53041 499 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 DCUN1D4Q92564 292 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 CDC6Q99741 560 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 SPHK2Q9NRA0 654 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 IGLON5A6NGN9 336 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 OPRL1P41146 370 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 TAS2R38P59533 333 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 ELOCQ15369 112 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 GTDC1Q4AE62 458 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 GPR139Q6DWJ6 353 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 DPY19L4Q7Z388 723 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 MEX3DQ86XN8 651 aaKnown RBP17.1■□□□□ 0.33
COL5A3-201ENST00000264828 TP53INP2Q8IXH6 220 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 APIPQ96GX9 242 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 LRFN1Q9P244 771 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 GPR34Q9UPC5 381 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 KAT6AQ92794 2004 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 CIB4A0PJX0 185 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 NME4O00746 187 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 ARPC5O15511 151 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF254O75437 659 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 METTL2BQ6P1Q9 378 aaKnown RBP17.1■□□□□ 0.33
COL5A3-201ENST00000264828 HACD2Q6Y1H2 254 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 ECHDC3Q96DC8 303 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 PLEKHA3Q9HB20 300 aa17.1■□□□□ 0.33
COL5A3-201ENST00000264828 PORP16435 677 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PGCP20142 388 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 AKR1C2P52895 323 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 CLDN8P56748 225 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 SIM1P81133 766 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 DYRK1AQ13627 763 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 SLC18B1Q6NT16 456 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 SAMD8Q96LT4 415 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 HYLS1Q96M11 299 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 BOCQ9BWV1 1114 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 MEIS3P1A6NDR6 274 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 CENPBD1B2RD01 187 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PFKMP08237 780 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms