RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RTCAO00442 366 aaKnown RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 RNASET2O00584 256 aaKnown RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 PEX1O43933 1283 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 SERPIND1P05546 499 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 IL3P08700 152 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ATP6V1C1P21283 382 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ALAS2P22557 587 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 GABRA4P48169 554 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 MAPK12P53778 367 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 KLC1Q07866 573 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ANKRD26P1Q6NSI1 321 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 DNAJC14Q6Y2X3 702 aaPredicted RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 RNF44Q7L0R7 432 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 SPATA24Q86W54 205 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ANKRD46Q86W74 232 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 VPS37AQ8NEZ2 397 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 OR11G2Q8NGC1 345 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 HAS2Q92819 552 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 PPCDCQ96CD2 204 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 TM4SF18Q96CE8 201 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 MS4A6EQ96DS6 147 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 THAP11Q96EK4 314 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ZNF764Q96H86 408 aaPredicted RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 VPS50Q96JG6 964 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 LRGUKQ96M69 825 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ZNF583Q96ND8 569 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ZFYVE21Q9BQ24 234 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ZNF559Q9BR84 538 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 IKZF5Q9H5V7 419 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 SOX17Q9H6I2 414 aaPredicted RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 SYNPO2LQ9H987 977 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 ZNF160Q9HCG1 818 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 SH3BP4Q9P0V3 963 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 GMEB1Q9Y692 573 aa12.38□□□□□ -0.43
SGCA-201ENST00000262018 FLNAP21333 2647 aaKnown RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 A0A0A6YYD5 115 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 ARPC2O15144 300 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 SRPX2O60687 465 aaPredicted RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 CTSVO60911 334 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 BAG2O95816 211 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 ZCCHC18P0CG32 403 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 GZMMP51124 257 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 SESN3P58005 492 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 OR4D2P58180 307 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 PMP22Q01453 160 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 FOLH1Q04609 750 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 CEBPEQ15744 281 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 TOR1AIP1Q5JTV8 583 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 FBXO42Q6P3S6 717 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 CYP2R1Q6VVX0 501 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 OVCH1Q7RTY7 1134 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 VN1R4Q7Z5H5 301 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 IFNEQ86WN2 208 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 CALHM3Q86XJ0 350 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 MCATQ8IVS2 390 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 NATD1Q8N6N6 113 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 SRFBP1Q8NEF9 429 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 TNIP2Q8NFZ5 429 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 GOT1L1Q8NHS2 421 aaPredicted RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 NT5CQ8TCD5 201 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 NRG4Q8WWG1 115 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 DNAJC9Q8WXX5 260 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 FKBP10Q96AY3 582 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 SDCCAG3Q96C92 435 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 TM4SF19Q96DZ7 209 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 PANX1Q96RD7 426 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 SPSB2Q99619 263 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 TBCDQ9BTW9 1192 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 THUMPD3Q9BV44 507 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 SLC6A16Q9GZN6 736 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 KLHL31Q9H511 634 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 KAT8Q9H7Z6 458 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 EGFL7Q9UHF1 273 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 MAGEL2Q9UJ55 1249 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 USP22Q9UPT9 525 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 ZNF835Q9Y2P0 537 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 FAM220BPB1ANY3 271 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 TMPRSS11DO60235 418 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 PRAMEF2O60811 474 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 CPSF4O95639 269 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 HPP00738 406 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 GSNP06396 782 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 HOXB6P17509 224 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 DDX5P17844 614 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 DDCP20711 480 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 SLC7A1P30825 629 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 PLA2G16P53816 162 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 STXBP1P61764 594 aaKnown RBP12.37□□□□□ -0.43
SGCA-201ENST00000262018 TAF11Q15544 211 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 NKG7Q16617 165 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 MPEG1Q2M385 716 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 TCTE1Q5JU00 501 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
SGCA-201ENST00000262018 ZNF793Q6ZN11 406 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms