RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 KDM4BO94953 1096 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 CPMP14384 443 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 HOXC8P31273 242 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 C3orf38Q5JPI3 329 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 UEVLDQ8IX04 471 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 ZNF619Q8N2I2 560 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 SFXN5Q8TD22 340 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 SLC45A3Q96JT2 553 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 MND1Q9BWT6 205 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GRXCR2A6NFK2 248 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 GCGRP47871 477 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ADAM8P78325 824 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 MALLQ13021 153 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 RGS21Q2M5E4 152 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 YOD1Q5VVQ6 348 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 METRNLQ641Q3 311 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 C15orf40Q8WUR7 153 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 MACROD1Q9BQ69 325 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 UTP23Q9BRU9 249 aaKnown RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 MROQ9BYG7 248 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 PEX16Q9Y5Y5 336 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 HTR3EA5X5Y0 456 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 HCKP08631 526 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ACTC1P68032 377 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ACTA1P68133 377 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GALK2Q01415 458 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 C1QTNF2Q9BXJ5 285 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 CXorf21Q9HAI6 301 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GPN1Q9HCN4 374 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 ATP13A2Q9NQ11 1180 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 MBNL1Q9NR56 388 aaKnown RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 PCDH10Q9P2E7 1040 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 MMACHCQ9Y4U1 282 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 H0YIV9 168 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 HMGN2P05204 90 aaKnown RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 CLUP10909 449 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 HTR3AP46098 478 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 TGFBR3Q03167 851 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 CCDC80Q76M96 950 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 JAGN1Q8N5M9 183 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 KCTD7Q96MP8 289 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ACPTQ9BZG2 426 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ANKRA2Q9H9E1 313 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ACSS1Q9NUB1 689 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 SPHK1Q9NYA1 384 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 KCMF1Q9P0J7 381 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 EXOSC1Q9Y3B2 195 aaKnown RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 LAMB2P55268 1798 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 OR5K3A6NET4 321 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 B4GALT3O60512 393 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GALR3O60755 368 aaPredicted RBP13.16□□□□□ -0.3
CDH1-201ENST00000261769 ABOP16442 354 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 PRKCAP17252 672 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 LHCGRP22888 699 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GDF1P27539 372 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 MXD1Q05195 221 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 CBFBQ13951 182 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 GGTA1PQ4G0N0 100 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 CARD17Q5XLA6 110 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 WBP2Q969T9 261 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 TXLNGYQ9BZA5 131 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 MAGIXQ9H6Y5 334 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 ABCB9Q9NP78 766 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 SESN1Q9Y6P5 492 aa13.16□□□□□ -0.3
CDH1-201ENST00000261769 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 METTL12A8MUP2 240 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 VBP1P61758 197 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 RGNQ15493 299 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 PYCR3Q53H96 274 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 TMEM201Q5SNT2 666 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 TMPRSS9Q7Z410 1059 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
CDH1-201ENST00000261769 OR52R1Q8NGF1 315 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 THSD1Q9NS62 852 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 SARDHQ9UL12 918 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 TSC22D2O75157 780 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 SDHBP21912 280 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 GSTT1P30711 240 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 GAS6Q14393 721 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 LRRC17Q8N6Y2 441 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
CDH1-201ENST00000261769 ARRDC1-AS1Q9H2J1 176 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms