RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ACOXLQ9NUZ1 547 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 KCNN3Q9UGI6 736 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 KLK13Q9UKR3 277 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 DNPEPQ9ULA0 475 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SH3GLB1Q9Y371 365 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PLEKHG2Q9H7P9 1386 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 OR5H15A6NDH6 313 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CFAP73A6NFT4 308 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ARHGAP42A6NI28 874 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 E9PQ18 207 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PI15O43692 258 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 FRAT2O75474 233 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 OR6B1O95007 311 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PTBP3O95758 552 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SERPINF2P08697 491 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 UGT1A6P19224 532 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PSMA5P28066 241 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RPL9P32969 192 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ETV5P41161 510 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ACY1Q03154 408 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GFPT1Q06210 699 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PAX8Q06710 450 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SPAG1Q07617 926 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PPIDQ08752 370 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RBBP4Q09028 425 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CFAP157Q5JU67 520 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RAET1GQ6H3X3 334 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 C8orf74Q6P047 294 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CENPQQ7L2Z9 268 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ITIH5Q86UX2 942 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 KCNMB4Q86W47 210 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GVQW1Q8N7I0 195 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 BANPQ8N9N5 519 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 EIF1ADQ8N9N8 165 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 OR52E1Q8NGJ3 308 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 OR4L1Q8NH43 312 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 NPRL2Q8WTW4 380 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ZBTB18Q99592 522 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GPA33Q99795 319 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CCT7Q99832 543 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ATF6BQ99941 703 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 FAM213AQ9BRX8 229 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SPZ1Q9BXG8 430 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TSGA10Q9BZW7 698 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GANQ9H2C0 597 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RMND5AQ9H871 391 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GPN1Q9HCN4 374 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 FAM212BQ9NTI7 297 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PIGVQ9NUD9 493 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RAB20Q9NX57 234 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 THYN1Q9P016 225 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 MTRF1LQ9UGC7 380 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ATP6V1HQ9UI12 483 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 MUTYHQ9UIF7 546 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SNX6Q9UNH7 406 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 MRPS2Q9Y399 296 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SPACA6W5XKT8 324 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TNIKQ9UKE5 1360 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 GON4LQ3T8J9 2241 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 MAP3K19Q56UN5 1328 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 A0A087WZY1 265 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 A0A0U1RQS6 177 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 NCF1BA6NI72 391 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ZSCAN5BA6NJL1 495 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 NCF1CA8MVU1 366 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 YKT6O15498 198 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 B4GAT1O43505 415 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 RANBP6O60518 1105 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 NPPAP01160 153 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CSF2P04141 144 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 UBTFL6P0CB48 400 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF3P17036 446 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 HNRNPA2B1P22626 353 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CCR1P32246 355 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 RFC2P35250 354 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 METAP1P53582 386 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 PRRX1P54821 245 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 HADHBP55084 474 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ATP5IP56385 69 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 SRPXP78539 464 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 OVGP1Q12889 678 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 RAPSNQ13702 412 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 LPAL2Q16609 132 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 HADHQ16836 314 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 POM121L1PQ3SYA9 428 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 SMUG1Q53HV7 270 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 C1orf189Q5VU69 101 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 PAQR6Q6TCH4 344 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ARSKQ6UWY0 536 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 TOM1L2Q6ZVM7 507 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 TBC1D10CQ8IV04 446 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 C17orf47Q8NEP4 570 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 OR6M1Q8NGM8 313 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 OR4A16Q8NH70 328 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CHPT1Q8WUD6 406 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 FRAT1Q92837 279 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 DTD2Q96FN9 168 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 PCED1BQ96HM7 432 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms