RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PLXND1Q9Y4D7 1925 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 PTPRBP23467 1997 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 ZNF638Q14966 1978 aaKnown RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TRAV18A0A075B6X5 111 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 ARL5CA6NH57 179 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 CCDC69A6NI79 296 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SLC9B1P1A6NJY1 282 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 C17orf105B2RV13 164 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PRSS46E5RG02 174 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SCO2O43819 266 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 BCAS2O75934 225 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SBK2P0C263 348 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 CSRP1P21291 193 aaKnown RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SLC6A12P48065 614 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SLC12A3P55017 1021 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PRKCEQ02156 737 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 WASHC5Q12768 1159 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 TAF10Q12962 218 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SLC1A5Q15758 541 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 ACKR1Q16570 336 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 UGP2Q16851 508 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 HFEQ30201 348 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PDLIM3Q53GG5 364 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 XKR6Q5GH73 641 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 TOR1AIP1Q5JTV8 583 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 FAM78AQ5JUQ0 283 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PPM1LQ5SGD2 360 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PRAMEF8Q5VWM4 474 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 KCTD11Q693B1 232 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 CD300LGQ6UXG3 332 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 MIER3Q7Z3K6 550 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PRSS42Q7Z5A4 293 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 RTN4RL2Q86UN3 420 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 ZNF410Q86VK4 478 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 CROCCP3Q8IVE0 287 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 AQP12AQ8IXF9 295 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 EID3Q8N140 333 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PRSS35Q8N3Z0 413 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SFRP1Q8N474 314 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 KBTBD8Q8NFY9 601 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 DYRK2Q92630 601 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 TMEM237Q96Q45 408 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 RUFY1Q96T51 708 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 NAP1L3Q99457 506 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 CABLES2Q9BTV7 478 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 C1orf21Q9H246 121 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 RIMS4Q9H426 269 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 C10orf88Q9H8K7 445 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PNPLA3Q9NST1 481 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 DNAJC11Q9NVH1 559 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 SLC12A6Q9UHW9 1150 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 ADAM28Q9UKQ2 775 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 HBS1LQ9Y450 684 aaKnown RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PTPRDP23468 1912 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 ADAMTS9Q9P2N4 1935 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 TEP1Q99973 2627 aaKnown RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 TRIP11Q15643 1979 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 PCNX3Q9H6A9 2034 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 UBR5O95071 2799 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-201ENST00000259043 COL6A6A6NMZ7 2263 aa4.1□□□□□ -1.75
TRA2B-201ENST00000259043 FLNCQ14315 2725 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 PLXNB3Q9ULL4 1909 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 ABCA7Q8IZY2 2146 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 SPTAN1Q13813 2472 aaKnown RBP4.09□□□□□ -1.75
TRA2B-201ENST00000259043 A0A0A6YYC8 382 aaPredicted RBP4.09□□□□□ -1.75
TRA2B-201ENST00000259043 TRBV2A0A0J9YWF9 115 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 E7EWF7 191 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 I3L1I5 382 aaPredicted RBP4.09□□□□□ -1.75
TRA2B-201ENST00000259043 VEGFDO43915 354 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 PRB1P04280 392 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 CCDC192P0DO97 292 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 KRT3P12035 628 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 GP1BBP13224 206 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 PSMA5P28066 241 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 SSTR1P30872 391 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 GDI1P31150 447 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 OR3A3P47888 321 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 ADARP55265 1226 aaKnown RBP4.09□□□□□ -1.75
TRA2B-201ENST00000259043 GFPT1Q06210 699 aaPredicted RBP4.09□□□□□ -1.75
TRA2B-201ENST00000259043 OPCMLQ14982 345 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 TTC27Q6P3X3 843 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 CATSPER4Q7RTX7 472 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 HDDC3Q8N4P3 179 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 MARVELD2Q8N4S9 558 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 DEFB124Q8NES8 71 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 ANKRD20A12PQ8NF67 263 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 TBC1D31Q96DN5 1066 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 MSANTD3Q96H12 275 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 C18orf12Q96KH6 178 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 RUNDC3BQ96NL0 473 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 RASL10BQ96S79 203 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 ZNF577Q9BSK1 485 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 FGFBP2Q9BYJ0 223 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 TRIM7Q9C029 511 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 ATP13A3Q9H7F0 1226 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 MAGEF1Q9HAY2 307 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 NOCTQ9UK39 431 aaKnown RBP4.09□□□□□ -1.75
TRA2B-201ENST00000259043 MAN1B1Q9UKM7 699 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 KLK4Q9Y5K2 254 aa4.09□□□□□ -1.75
TRA2B-201ENST00000259043 COL12A1Q99715 3063 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms