RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 C8orf59Q8N0T1 100 aaPredicted RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 CARFQ8N187 725 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 NAA50Q9GZZ1 169 aaKnown RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 QRSL1Q9H0R6 528 aaKnown RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 EXD2Q9NVH0 621 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 NTMQ9P121 344 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 PTGFRNQ9P2B2 879 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 TESMINQ9Y4I5 508 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 PCDHGA8Q9Y5G5 932 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 CALRP27797 417 aaKnown RBP17.66■□□□□ 0.42
TRIM47-201ENST00000254816 RRM2P31350 389 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 ANXA11P50995 505 aaKnown RBP17.66■□□□□ 0.42
TRIM47-201ENST00000254816 CRISP3P54108 245 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 MGAT2Q10469 447 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 TCEAL6Q6IPX3 200 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 TMEM71Q6P5X7 295 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 ADAMTS15Q8TE58 950 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 TCEAL3Q969E4 200 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 RBM4BQ9BQ04 359 aaKnown RBP17.66■□□□□ 0.42
TRIM47-201ENST00000254816 RBM4Q9BWF3 364 aaKnown RBP17.66■□□□□ 0.42
TRIM47-201ENST00000254816 YIPF2Q9BWQ6 316 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 PRTFDC1Q9NRG1 225 aa17.66■□□□□ 0.42
TRIM47-201ENST00000254816 SAMHD1Q9Y3Z3 626 aaKnown RBP17.66■□□□□ 0.42
TRIM47-201ENST00000254816 HYAL3O43820 417 aaPredicted RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 CER1O95813 267 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 MAOAP21397 527 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 AVPR2P30518 371 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 HOXD12P35452 270 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 XCR1P46094 333 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 MAPK10P53779 464 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 FOXD4Q12950 439 aaPredicted RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 PUM1Q14671 1186 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 MEP1AQ16819 746 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 SHQ1Q6PI26 577 aaKnown RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 FAM181AQ8N9Y4 354 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF555Q8NEP9 628 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 CDS1Q92903 461 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF607Q96SK3 696 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 WFDC6Q9BQY6 131 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF768Q9H5H4 540 aaKnown RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 DNAAF2Q9NVR5 837 aaKnown RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 USE1Q9NZ43 259 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 SEC14L3Q9UDX4 400 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 C19orf53Q9UNZ5 99 aaPredicted RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 GPC6Q9Y625 555 aaPredicted RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 YKT6O15498 198 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF749O43361 778 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 OR10H2O60403 315 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 PDE9AO76083 593 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 FUT4P22083 530 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 STX4Q12846 297 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 CTU2Q2VPK5 515 aaKnown RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF773Q6PK81 442 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 COMTD1Q86VU5 262 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 GEMIN6Q8WXD5 167 aaKnown RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 YTHDF1Q9BYJ9 559 aaKnown RBP17.65■□□□□ 0.42
TRIM47-201ENST00000254816 ARRDC1-AS1Q9H2J1 176 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 REEP1Q9H902 201 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 FANCEQ9HB96 536 aa17.65■□□□□ 0.42
TRIM47-201ENST00000254816 H0YIG0 161 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ATE1O95260 518 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 SLC35E2P0CK97 266 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ACP2P11117 423 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 FAM214AQ32MH5 1076 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 TTC23Q5W5X9 447 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 NIPAL1Q6NVV3 410 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 CDC73Q6P1J9 531 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 GALNT5Q7Z7M9 940 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 HIPK1Q86Z02 1210 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF501Q96CX3 271 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF300Q96RE9 604 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ALOXE3Q9BYJ1 711 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 TIMMDC1Q9NPL8 285 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 FGF21Q9NSA1 209 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 MRPS33Q9Y291 106 aaKnown RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 CLDN16Q9Y5I7 305 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 SEC16AO15027 2179 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 CTNSO60931 367 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 MITFO75030 526 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 CPNE6O95741 557 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 DNAJA1P31689 397 aaKnown RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 CHRNEQ04844 493 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 PIGFQ07326 219 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 DUSP5Q16690 384 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF528Q3MIS6 628 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 C16orf62Q7Z3J2 963 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 RABEPKQ7Z6M1 372 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF595Q8IYB9 648 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 GPR135Q8IZ08 494 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 OR52J3Q8NH60 311 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 VANGL1Q8TAA9 524 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 BBS10Q8TAM1 723 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 IFI44Q8TCB0 444 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 ZG16BQ96DA0 208 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 RDH12Q96NR8 316 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 LRRN3Q9H3W5 708 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 THSD1Q9NS62 852 aa17.64■□□□□ 0.41
TRIM47-201ENST00000254816 PDP1Q9P0J1 537 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 TMEFF2Q9UIK5 374 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-201ENST00000254816 H3BMQ9 156 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms