RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PRAMEF14Q5SWL7 426 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 DCST1Q5T197 706 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 ZBTB37Q5TC79 503 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 PRAMEF13Q5VWM6 474 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 PLA2G15Q8NCC3 412 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 HYLS1Q96M11 299 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 ACAT2Q9BWD1 397 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 POLR2J3Q9H1A7 115 aaKnown RBP17.86■□□□□ 0.45
SNX4-201ENST00000251775 OR52A5Q9H2C5 316 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 DPEP2Q9H4A9 486 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 EIF3KQ9UBQ5 218 aaKnown RBP17.86■□□□□ 0.45
SNX4-201ENST00000251775 ASF1AQ9Y294 204 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 EDDM13A0A1B0GTR0 161 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 WNT4P56705 351 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 IL18Q14116 193 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 SYT14P1Q58G82 188 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 RPS26P11Q5JNZ5 115 aaPredicted RBP17.85■□□□□ 0.45
SNX4-201ENST00000251775 CCNJQ5T5M9 372 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 PGBD2Q6P3X8 592 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 LSMEM1Q8N8F7 131 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 OR8H1Q8NGG4 311 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 ZNF514Q96K75 400 aaPredicted RBP17.85■□□□□ 0.45
SNX4-201ENST00000251775 ZDHHC4Q9NPG8 344 aa17.85■□□□□ 0.45
SNX4-201ENST00000251775 A0A1W2PRB8 838 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 CDK2AP1O14519 115 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 PI15O43692 258 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 DDX5P17844 614 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 RPL3P39023 403 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 EVX1P49640 407 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 GAS1P54826 345 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 FABP5Q01469 135 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 MRPL28Q13084 256 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 ELAVL3Q14576 367 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 TCTN3Q6NUS6 607 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 FAM26EQ8N5C1 309 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 GPR32P1Q8NGA4 272 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 SETD7Q8WTS6 366 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 DNAJA4Q8WW22 397 aaPredicted RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 AKAP1Q92667 903 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNX4-201ENST00000251775 SLC6A16Q9GZN6 736 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 GPR34Q9UPC5 381 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 CDH10Q9Y6N8 788 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 DENND4AQ7Z401 1863 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 CHD7Q9P2D1 2997 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 SLC30A4O14863 429 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 TSC22D2O75157 780 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 TNNI3P19429 210 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 SOAT1P35610 550 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 AGFG1P52594 562 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 TPBGQ13641 420 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 ZNF234Q14588 700 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 SF3A2Q15428 464 aaKnown RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 METAP1DQ6UB28 335 aaPredicted RBP17.84■□□□□ 0.45
SNX4-201ENST00000251775 FAM129CQ86XR2 697 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 SLC37A3Q8NCC5 494 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 ZSCAN32Q9NX65 697 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 GLTPQ9NZD2 209 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 TAAR2Q9P1P5 351 aa17.84■□□□□ 0.45
SNX4-201ENST00000251775 ISM1B1AKI9 464 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 INMT-MINDY4F8WBC2 141 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 APOL3O95236 402 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 TBX6O95947 436 aaPredicted RBP17.83■□□□□ 0.45
SNX4-201ENST00000251775 POLR2CP19387 275 aaPredicted RBP17.83■□□□□ 0.45
SNX4-201ENST00000251775 RAB25P57735 213 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 DSTNP60981 165 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 TMEM52BQ4KMG9 183 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 IQCF2Q8IXL9 164 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 C12orf76Q8N812 135 aaPredicted RBP17.83■□□□□ 0.45
SNX4-201ENST00000251775 GATAD2BQ8WXI9 593 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 MTERF3Q96E29 417 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 SENP5Q96HI0 755 aaPredicted RBP17.83■□□□□ 0.45
SNX4-201ENST00000251775 ATF6BQ99941 703 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 SLC23A2Q9UGH3 650 aa17.83■□□□□ 0.45
SNX4-201ENST00000251775 TEX51A0A1B0GUA7 166 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 LINC00862A6NCI5 91 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 FAAHO00519 579 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 VEGFDO43915 354 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 SCO1O75880 301 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 LCTLQ6UWM7 567 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 UNC5DQ6UXZ4 953 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 ZNF782Q6ZMW2 699 aaPredicted RBP17.83■□□□□ 0.44
SNX4-201ENST00000251775 TRILQ7L0X0 811 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 SLC9B2Q86UD5 537 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 RBM45Q8IUH3 476 aaKnown RBP17.83■□□□□ 0.44
SNX4-201ENST00000251775 OMA1Q96E52 524 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 LRR1Q96L50 414 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 ZNF582Q96NG8 517 aaPredicted RBP17.83■□□□□ 0.44
SNX4-201ENST00000251775 POLDIP3Q9BY77 421 aaKnown RBP17.83■□□□□ 0.44
SNX4-201ENST00000251775 DEC1Q9P2X7 70 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 GSTK1Q9Y2Q3 226 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 DOCK9Q9BZ29 2069 aa17.83■□□□□ 0.44
SNX4-201ENST00000251775 SGK494L7N484 410 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 CASKO14936 926 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 NR2F6P10588 404 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 PER3P56645 1201 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 RIN1Q13671 783 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 C3orf38Q5JPI3 329 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 REEP3Q6NUK4 255 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 ERN2Q76MJ5 926 aaKnown RBP17.82■□□□□ 0.44
SNX4-201ENST00000251775 FBXL6Q8N531 539 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms