RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 SLC28A2O43868 658 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 MMP20O60882 483 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 SMSP52788 366 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 MLLT1Q03111 559 aaPredicted RBP13.1□□□□□ -0.31
EGR1-201ENST00000239938 CSTF1Q05048 431 aaKnown RBP13.1□□□□□ -0.31
EGR1-201ENST00000239938 KIAA1211LQ6NV74 962 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 TEX261Q6UWH6 196 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 GAREM2Q75VX8 874 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
EGR1-201ENST00000239938 OR5P2Q8WZ92 322 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 IL17FQ96PD4 163 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 SMAD5Q99717 465 aaKnown RBP13.1□□□□□ -0.31
EGR1-201ENST00000239938 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 LRFN2Q9ULH4 789 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 U3KQ87 197 aa13.1□□□□□ -0.31
EGR1-201ENST00000239938 THSD7BQ9C0I4 1608 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 SLC22A5O76082 557 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 PTBP1P26599 531 aaKnown RBP eCLIP13.09□□□□□ -0.31
EGR1-201ENST00000239938 VIPR1P32241 457 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 PTGER1P34995 402 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 NNMTP40261 264 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 DSG2Q14126 1118 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
EGR1-201ENST00000239938 POM121L1PQ3SYA9 428 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 RAET1GQ6H3X3 334 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 IL20RBQ6UXL0 311 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 PRICKLE2Q7Z3G6 844 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 MRGPREQ86SM8 312 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 GHDCQ8N2G8 530 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 GLYATL1Q969I3 302 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 PPIL3Q9H2H8 161 aaKnown RBP13.09□□□□□ -0.31
EGR1-201ENST00000239938 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 GLTPQ9NZD2 209 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 CLCA2Q9UQC9 943 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 VCANP13611 3396 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 A0A087WUU8 490 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 SYPP08247 313 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 GJA1P17302 382 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
EGR1-201ENST00000239938 BCL2L15Q5TBC7 163 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 CFAP206Q8IYR0 622 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 CPXM2Q8N436 756 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 DNAJA4Q8WW22 397 aaPredicted RBP13.09□□□□□ -0.31
EGR1-201ENST00000239938 F2RL3Q96RI0 385 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 CNIH4Q9P003 139 aa13.09□□□□□ -0.31
EGR1-201ENST00000239938 EXOSC1Q9Y3B2 195 aaKnown RBP13.09□□□□□ -0.31
EGR1-201ENST00000239938 LINC00862A6NCI5 91 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.31
EGR1-201ENST00000239938 B8ZZF3 427 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 RFPL3O75679 317 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 CH25HO95992 272 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 TIMP2P16035 220 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 RAB8AP61006 207 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 COL9A2Q14055 689 aaPredicted RBP13.08□□□□□ -0.31
EGR1-201ENST00000239938 FBXL6Q8N531 539 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 ZNF680Q8NEM1 530 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 BBS1Q8NFJ9 593 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 AUTS2Q8WXX7 1259 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 SMPDL3AQ92484 453 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 FOPNLQ96NB1 174 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 LHX9Q9NQ69 397 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 PRKAB1Q9Y478 270 aa13.08□□□□□ -0.31
EGR1-201ENST00000239938 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 SH3BP5O60239 455 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 LEFTY1O75610 366 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 CXCL3P19876 107 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 BSGP35613 385 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 FRKP42685 505 aaPredicted RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 SMIM11AP58511 58 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 HIST2H2AA3Q6FI13 130 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 OR6C4Q8NGE1 309 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 XAGE5Q8WWM1 108 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 EXOSC8Q96B26 276 aaKnown RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 PHF21AQ96BD5 680 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 AP2M1Q96CW1 435 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 ZNF607Q96SK3 696 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 ZSCAN5AQ9BUG6 496 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 ACAT2Q9BWD1 397 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 OR51I1Q9H343 314 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 GHITMQ9H3K2 345 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 EXTL2Q9UBQ6 330 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 MGAT4AQ9UM21 535 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 PLAGL1Q9UM63 463 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 SIRT4Q9Y6E7 314 aaPredicted RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 CACNB4O00305 520 aaPredicted RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 PDPK1O15530 556 aa13.08□□□□□ -0.32
EGR1-201ENST00000239938 EIF4EP06730 217 aaKnown RBP13.08□□□□□ -0.32
EGR1-201ENST00000239938 CKMP06732 381 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms