RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 RBM44Q6ZP01 1051 aaKnown RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 SSX8Q7RTT4 187 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 IRF2BP2Q7Z5L9 587 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 SLC43A2Q8N370 569 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 OR1J4Q8NGS1 313 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 ZNF382Q96SR6 550 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 FKRPQ9H9S5 495 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 DTLQ9NZJ0 730 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 LAMB4A4D0S4 1761 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 LPCAT3Q6P1A2 487 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 MKXQ8IYA7 352 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 HS3ST5Q8IZT8 346 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 C1orf87Q8N0U7 546 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 ZNF619Q8N2I2 560 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 MS4A15Q8N5U1 240 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 CMSS1Q9BQ75 279 aaKnown RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 PIGQQ9BRB3 760 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 MAGIXQ9H6Y5 334 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 KIAA1456Q9P272 454 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 COQ4Q9Y3A0 265 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 A0A1W2PP18 115 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 B4DXG7 233 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 SULT2B1O00204 365 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 MPSTP25325 297 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 GDF1P27539 372 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 EFNA3P52797 238 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 INCA1Q0VD86 236 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 CLEC12AQ5QGZ9 265 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 ZNF773Q6PK81 442 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 TRIM46Q7Z4K8 759 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 BOLLQ8N9W6 283 aaKnown RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 ASB17Q8WXJ9 295 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 ASB9Q96DX5 294 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 TIMM29Q9BSF4 260 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 POT1Q9NUX5 634 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 GRHL1Q9NZI5 618 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 PIK3C2AO00443 1686 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 M0R036 132 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 GBE1Q04446 702 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 CATR1Q13166 79 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 CCL14Q16627 93 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 CMC1Q7Z7K0 106 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 TMEM139Q8IV31 216 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 SPATA6LQ8N4H0 392 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 OR5H2Q8NGV7 314 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 S100PBPQ96BU1 408 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 SH3YL1Q96HL8 342 aaPredicted RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 DKK3Q9UBP4 350 aa7.07□□□□□ -1.28
MED28-201ENST00000237380 FARSAQ9Y285 508 aaKnown RBP7.07□□□□□ -1.28
MED28-201ENST00000237380 CRYZL1O95825 349 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TAS2R40P59535 323 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TMEM211Q6ICI0 200 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 NXPE4Q6UWF7 544 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 CDRT4Q8N9R6 151 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 JOSD2Q8TAC2 188 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 LNX1Q8TBB1 728 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 OR5B2Q96R09 309 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 OXSMQ9NWU1 459 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 ZNF223Q9UK11 482 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 PMF1-BGLAPU3KQ54 211 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 NAA10P41227 235 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 NOVA1P51513 510 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 ZBED5Q49AG3 693 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 CLEC6AQ6EIG7 209 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 SLC16A9Q7RTY1 509 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 ERI1Q8IV48 349 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 LILRB2Q8N423 598 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 SCAMP5Q8TAC9 235 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 hCG_2039718K7EN88 272 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TGFB1I1O43294 461 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TM4SF4P48230 202 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 SUB1P53999 127 aaKnown RBP eCLIP7.06□□□□□ -1.28
MED28-201ENST00000237380 NKAPLQ5M9Q1 402 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 KIAA1614Q5VZ46 1190 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TMEM214Q6NUQ4 689 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 CISD2Q8N5K1 135 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 PLRG1O43660 514 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 CKMT1AP12532 417 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TIA1P31483 386 aaKnown RBP eCLIP7.06□□□□□ -1.283e-9■■■□□ 19.2
MED28-201ENST00000237380 MLF2Q15773 248 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 GOLM1Q8NBJ4 401 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 SNRNP27Q8WVK2 155 aaKnown RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 DPH2Q9BQC3 489 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 SNTG1Q9NSN8 517 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 CMAHPQ9Y471 501 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 AKAP11Q9UKA4 1901 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 IGLON5A6NGN9 336 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 LILRB5O75023 590 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 NR4A2P43354 598 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 OGFRL1Q5TC84 451 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 ZNF808Q8N4W9 903 aaPredicted RBP7.06□□□□□ -1.28
MED28-201ENST00000237380 TEPSINQ96N21 525 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 SLC25A31Q9H0C2 315 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 TPT1P8Q9HAU6 139 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 ZNF160Q9HCG1 818 aa7.06□□□□□ -1.28
MED28-201ENST00000237380 DLGAP4Q9Y2H0 992 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms