RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 HTR1AP08908 422 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 STC1P52823 247 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 VAMP2P63027 116 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 UBXN11Q5T124 520 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ETFRF1Q6IPR1 90 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 HIST2H3AQ71DI3 136 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 TRMT11Q7Z4G4 463 aaKnown RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 SLC44A3Q8N4M1 653 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 OR5M3Q8NGP4 307 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 OR2A12Q8NGT7 310 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZDHHC15Q96MV8 337 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZIC5Q96T25 663 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 HMX1Q9NP08 348 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ISYNA1Q9NPH2 558 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ACOT7O00154 380 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 NR2C1P13056 603 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 NME1P15531 152 aaKnown RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 EEF1DP3Q658K8 133 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 FCRLBQ6BAA4 426 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 OTOP2Q7RTS6 562 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 TPRA1Q86W33 373 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 CHST4Q8NCG5 386 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 NLGN2Q8NFZ4 835 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF384Q8TF68 577 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 TMEM174Q8WUU8 243 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 AUTS2Q8WXX7 1259 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 LY86O95711 162 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ATP5C1P36542 298 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 VASNQ6EMK4 673 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ENKD1Q9H0I2 346 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 SPATA6Q9NWH7 488 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ABRACLQ9P1F3 81 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 KPTNQ9Y664 436 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 KIF1AQ12756 1690 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ABHD14A-ACY1A0A1B0GW23 586 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 EEF1E1-BLOC1S5C9J1V9 151 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 NIPSNAP2O75323 286 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 HOXC6P09630 235 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 EVX1P49640 407 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CYCSP99999 105 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ARMC12Q5T9G4 340 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 VSIG10LQ86VR7 867 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CNTN4Q8IWV2 1026 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ADGRG2Q8IZP9 1017 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 GTF3C2Q8WUA4 911 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ATOH1Q92858 354 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ATG4CQ96DT6 458 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TOE1Q96GM8 510 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 QTRT2Q9H974 415 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 A0A087WZY1 265 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 OR2T1O43869 369 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 VTNP04004 478 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CSF1P09603 554 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 GDNFP39905 211 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ADH7P40394 386 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CAMLGP49069 296 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 FRMPD2BQ6IN97 320 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 GPR135Q8IZ08 494 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 OR13C4Q8NGS5 318 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 PAPOLGQ9BWT3 736 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 SUCNR1Q9BXA5 334 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TRIM2Q9C040 744 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 VNN3Q9NY84 501 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TERTO14746 1132 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 PRAMEF12O95522 483 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 MAPK3P27361 379 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CCND3P30281 292 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 SRP9P49458 86 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 AKR1C2P52895 323 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 WDR5P61964 334 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ARHGAP1Q07960 439 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 IRF5Q13568 498 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF791Q3KP31 576 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ALKBH2Q6NS38 261 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 NLRP8Q86W28 1048 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 KLHDC8BQ8IXV7 354 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 SLC16A10Q8TF71 515 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ZC3HAV1LQ96H79 300 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 INPP5KQ9BT40 448 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 SLIT2O94813 1529 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TRDV1A0A1B0GX56 115 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 GFRA2O00451 464 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 RGS11O94810 467 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TUBG1P23258 451 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 RGS8P57771 180 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ALG11Q2TAA5 492 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TCEAL5Q5H9L2 206 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 C3orf38Q5JPI3 329 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ANKRD34AQ69YU3 496 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 RAET1GQ6H3X3 334 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 TMEM205Q6UW68 189 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF705AQ6ZN79 300 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 SLC35F3Q8IY50 421 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 PCSK9Q8NBP7 692 aaKnown RBP12.24□□□□□ -0.45
VAMP4-201ENST00000236192 OR4M1Q8NGD0 313 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 UPRTQ96BW1 309 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms