RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NANOGP1Q8N7R0 232 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 C2orf69Q8N8R5 385 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 YIPF4Q9BSR8 244 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 C1GALT1Q9NS00 363 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 OR6C2Q9NZP2 312 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 PRRG1O14668 218 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF197O14709 1029 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 NTN1O95631 604 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 ALDOBP05062 364 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 ATP1B2P14415 290 aaPredicted RBP13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 TIA1P31483 386 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 AP1S1P61966 158 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 PTSQ03393 145 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 TLE2Q04725 743 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 DSC1Q08554 894 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 GRIN2CQ14957 1233 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 MTFR2Q6P444 385 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF613Q6PF04 617 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 HSDL2Q6YN16 418 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 MSANTD1Q6ZTZ1 278 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 LAS2Q8IYD9 372 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 BOLLQ8N9W6 283 aaKnown RBP13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 DUSP18Q8NEJ0 188 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 OR52N2Q8NGI0 321 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 NANPQ8TBE9 248 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 XAGE5Q8WWM1 108 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 TMEM159Q96B96 161 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 ELMOD3Q96FG2 381 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 REEP4Q9H6H4 257 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 METTL17Q9H7H0 456 aaPredicted RBP13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
PCDHB3-201ENST00000231130 SEPT4O43236 478 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 SGCEO43556 437 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 C1SP09871 688 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 PDHA2P29803 388 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 ACSM5Q6NUN0 579 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 C3P1Q6ZMU1 363 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 Q6ZVL8 140 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 MARCH9Q86YJ5 346 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 LURAP1LQ8IV03 231 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 CLRN3Q8NCR9 226 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 ATOH1Q92858 354 aaPredicted RBP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 ABCG4Q9H172 646 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 CD93Q9NPY3 652 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 ENAMQ9NRM1 1142 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 NDUFB11Q9NX14 153 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 KCNMB2Q9Y691 235 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 CDH10Q9Y6N8 788 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 L7N2F9 121 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 DVL2O14641 736 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 APOC1P02654 83 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 IL3P08700 152 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 ALPPL2P10696 532 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 POU3F2P20265 443 aaPredicted RBP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 RAB3BP20337 219 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 SLC11A1P49279 550 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 PPP3R1P63098 170 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 SLBPQ14493 270 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 GGTA1PQ4G0N0 100 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 MORN1Q5T089 497 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 IDNKQ5T6J7 187 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 NLRC3Q7RTR2 1065 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 TBX5Q99593 518 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 TMEM43Q9BTV4 400 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 PLXNA4Q9HCM2 1894 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 PRMT3O60678 531 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 FABP5Q01469 135 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 FLI1Q01543 452 aaPredicted RBP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 OPCMLQ14982 345 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 PRSS53Q2L4Q9 553 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 MPEG1Q2M385 716 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF791Q3KP31 576 aaPredicted RBP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 TMEM88Q6PEY1 159 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 C19orf48Q6RUI8 117 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 IQCHQ86VS3 1027 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 UCN3Q969E3 161 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 KCNK12Q9HB15 430 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 EMC3Q9P0I2 261 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 SEC14L3Q9UDX4 400 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 LSM2Q9Y333 95 aaKnown RBP13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 PCDHGB7Q9Y5F8 929 aa13.37□□□□□ -0.27
PCDHB3-201ENST00000231130 TRBV5-4A0A0C4DH59 114 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 FAM74A7A6NL05 159 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 HRO43593 1189 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 TSPAN6O43657 245 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ATG12O94817 140 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 IGSF6O95976 241 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 STATHP02808 62 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms