RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 SLC35E2P0CK97 266 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 G6PDP11413 515 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 TACR1P25103 407 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 LSP1P33241 339 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 XKP51811 444 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 CLNS1AP54105 237 aaKnown RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 MPEG1Q2M385 716 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 OPN5Q6U736 354 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 CD163Q86VB7 1156 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 OR4N5Q8IXE1 308 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 ST13P4Q8IZP2 240 aaPredicted RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 LRRC25Q8N386 305 aaPredicted RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 NATD1Q8N6N6 113 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 CLHC1Q8NHS4 586 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 EXOSC8Q96B26 276 aaKnown RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 ZNF764Q96H86 408 aaPredicted RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 SENP5Q96HI0 755 aaPredicted RBP16.61■□□□□ 0.25
PFN1-201ENST00000225655 ART5Q96L15 291 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 BBS4Q96RK4 519 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 TRIM8Q9BZR9 551 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 DPY30Q9C005 99 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 ZDHHC11Q9H8X9 412 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 MRGBPQ9NV56 204 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 BAIAP2L1Q9UHR4 511 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 ZNF407Q9C0G0 2248 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 A0A0G2JMM0 328 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 A0A1W2PPB8 328 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 A0A1W2PRS3 328 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 KIR3DP1A8MWS1 328 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 C19orf84I3L1E1 186 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 PDE9AO76083 593 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 IGKV3-11P04433 115 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 CPMP14384 443 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 PORP16435 677 aaPredicted RBP16.6■□□□□ 0.25
PFN1-201ENST00000225655 CNR1P21554 472 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 GALNSP34059 522 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 MPIP34949 423 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 CLDN8P56748 225 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 PPIAP62937 165 aaKnown RBP16.6■□□□□ 0.25
PFN1-201ENST00000225655 PLGLB1Q02325 96 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 PTGR1Q14914 329 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 ZNF750Q32MQ0 723 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 LSM12Q3MHD2 195 aaKnown RBP16.6■□□□□ 0.25
PFN1-201ENST00000225655 PAOXQ6QHF9 649 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 GK5Q6ZS86 529 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 CPLX4Q7Z7G2 160 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 SLC22A16Q86VW1 577 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 ZFP28Q8NHY6 868 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 NUBPLQ8TB37 319 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.6■□□□□ 0.25
PFN1-201ENST00000225655 GFM2Q969S9 779 aaKnown RBP16.6■□□□□ 0.25
PFN1-201ENST00000225655 OR52B2Q96RD2 323 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 FAM173AQ9BQD7 235 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 TTTY12Q9BZ98 90 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 SLC35C2Q9NQQ7 365 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.6■□□□□ 0.25
PFN1-201ENST00000225655 AIG1Q9NVV5 245 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 FAM53CQ9NYF3 392 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 TAS2R7Q9NYW3 318 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 SH3BP4Q9P0V3 963 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 KLHL14Q9P2G3 628 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 HEY2Q9UBP5 337 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 HRH3Q9Y5N1 445 aa16.6■□□□□ 0.25
PFN1-201ENST00000225655 GMNCA6NCL1 334 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 E9PBE3 544 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 SCAMP2O15127 329 aaKnown RBP16.59■□□□□ 0.25
PFN1-201ENST00000225655 ZNF354AO60765 605 aaPredicted RBP16.59■□□□□ 0.25
PFN1-201ENST00000225655 TBX19O60806 448 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 GLSO94925 669 aaPredicted RBP16.59■□□□□ 0.25
PFN1-201ENST00000225655 KIR3DL1P43629 444 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 ARFIP2P53365 341 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 GYS2P54840 703 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 DIO3P55073 304 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 DPY19L1Q2PZI1 675 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 PIGGQ5H8A4 983 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 CPTPQ5TA50 214 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 MMP21Q8N119 569 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 MARVELD2Q8N4S9 558 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 CA5BP1Q8WTZ4 195 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 RIT1Q92963 219 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 PPWD1Q96BP3 646 aaKnown RBP16.59■□□□□ 0.25
PFN1-201ENST00000225655 SDCCAG3Q96C92 435 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 FBXL20Q96IG2 436 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 EGLN2Q96KS0 407 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 ZNF317Q96PQ6 595 aaPredicted RBP16.59■□□□□ 0.25
PFN1-201ENST00000225655 DEFB127Q9H1M4 99 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 TP63Q9H3D4 680 aaPredicted RBP16.59■□□□□ 0.25
PFN1-201ENST00000225655 SACM1LQ9NTJ5 587 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 COQ3Q9NZJ6 369 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 CES1P1Q9UKY3 287 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 FBN2P35556 2912 aa16.59■□□□□ 0.25
PFN1-201ENST00000225655 DNAJC13O75165 2243 aa16.58■□□□□ 0.25
PFN1-201ENST00000225655 FAM166BA8MTA8 275 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 G3V3Y1 287 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 PDPK1O15530 556 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 ATP1B1P05026 303 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 NT5EP21589 574 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 FEN1P39748 380 aaKnown RBP16.58■□□□□ 0.24
PFN1-201ENST00000225655 C21orf58P58505 322 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms