RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 SLC6A11P48066 632 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 PGGT1BP53609 377 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 DUS1LQ6P1R4 473 aaKnown RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 SYCE2Q6PIF2 218 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 OR52E1Q8NGJ3 308 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF675Q8TD23 568 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 RBMX2Q9Y388 322 aaKnown RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 PRSS38A1L453 326 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 DRGXA6NNA5 263 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 SGK494L7N484 410 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 ACTL6BO94805 426 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 GCH1P30793 250 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 GJA4P35212 333 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 ARL3P36405 182 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 ISCA2Q86U28 154 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 ACBD7Q8N6N7 88 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 GALNT6Q8NCL4 622 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 OR6C2Q9NZP2 312 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 PHRF1Q9P1Y6 1649 aaKnown RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 FAM205BPQ63HN1 556 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 TMEFF1Q8IYR6 380 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 VWA5B2Q8N398 1253 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 POGLUT1Q8NBL1 392 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 FRS2Q8WU20 508 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 HDAC2Q92769 488 aaKnown RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 SLC45A3Q96JT2 553 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 OR5B2Q96R09 309 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 KCMF1Q9P0J7 381 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 CPNE7Q9UBL6 633 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 GALNT11Q8NCW6 608 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 OR4K13Q8NH42 304 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 FAM174AQ8TBP5 190 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 MYNNQ9NPC7 610 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 DNAJC15Q9Y5T4 150 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 ANKRD28O15084 1053 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 GTF2F2P13984 249 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 TIMP2P16035 220 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 BCL2L15Q5TBC7 163 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 TRAPPC6BQ86SZ2 158 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 OR7G3Q8NG95 312 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 L3HYPDHQ96EM0 354 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 GJD2Q9UKL4 321 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF850A8MQ14 1090 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 H0YAE9 185 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 H3BML4 177 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-201ENST00000219334 CKMT1AP12532 417 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 ARHGAP19Q14CB8 494 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 MINDY1Q8N5J2 469 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 EID2Q8N6I1 236 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 SNIP1Q8TAD8 396 aaKnown RBP17.97■□□□□ 0.47
SMPD3-201ENST00000219334 C5AR2Q9P296 337 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 AMY2BP19961 511 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 LHCGRP22888 699 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 ERVPABLB-1P60509 514 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 OR9K2Q8NGE7 335 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 RHBDF1Q96CC6 855 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 SLC41A3Q96GZ6 507 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 TMEM185BQ9H7F4 350 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 UCKL1Q9NWZ5 548 aa17.97■□□□□ 0.47
SMPD3-201ENST00000219334 WNT7BP56706 349 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 CTBSQ01459 385 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 RSU1Q15404 277 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 FAM78AQ5JUQ0 283 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 LIPKQ5VXJ0 399 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 SHISA6Q6ZSJ9 500 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 AKAP1Q92667 903 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 SPTSSAQ969W0 71 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 LOC102723532A0A0G2JNH3 316 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 A0A1W2PPK0 400 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 H7C417 338 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 HPRP00739 348 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 CD68P34810 354 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 ARF3P61204 181 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 ARF1P84077 181 aaKnown RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 TMEM69Q5SWH9 247 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 SCML4Q8N228 414 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 TMEM130Q8N3G9 435 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 APIPQ96GX9 242 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 LRR1Q96L50 414 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 EXTL2Q9UBQ6 330 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 IGHEP01854 428 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 APLNRP35414 380 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 PSMA6P60900 246 aaKnown RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 TGFBR3Q03167 851 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 TAP2Q03519 686 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 NFATC4Q14934 902 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 SLC37A3Q8NCC5 494 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 RCBTB1Q8NDN9 531 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 C3orf58Q8NDZ4 430 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 SLC25A44Q96H78 314 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 MYRFLQ96LU7 910 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 TIMM29Q9BSF4 260 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 PITHD1Q9GZP4 211 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF350Q9GZX5 532 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 TRIM64BA6NI03 449 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 GKN3PP0CG01 181 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 PET100P0DJ07 73 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms