RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GNSP15586 552 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 NKX2-5P52952 324 aaPredicted RBP11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 CSNK1G2P78368 415 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 RTL10Q7L3V2 364 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 VRK2Q86Y07 508 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 IZUMO1Q8IYV9 350 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 RNF167Q9H6Y7 350 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 SBF1O95248 1867 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 OR2A25A4D2G3 310 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 ZNF888P0CJ79 500 aaPredicted RBP11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 HOXA9P31269 272 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 CHRNEQ04844 493 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 TMEM31Q5JXX7 168 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 CCNJQ5T5M9 372 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 DTX3Q8N9I9 347 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 ANKK1Q8NFD2 765 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 EXOSC1Q9Y3B2 195 aaKnown RBP11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 SNX11Q9Y5W9 270 aa11.66□□□□□ -0.54
TM9SF4-201ENST00000217315 A8MUA0 341 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 WWP2O00308 870 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ARHGAP33O14559 1287 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 AIFM1O95831 613 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 TNFP01375 233 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 CAPNS1P04632 268 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 MAGEA2P43356 314 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 BLVRAP53004 296 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 RPS15AP62244 130 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 METRNLQ641Q3 311 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 FIGLAQ6QHK4 219 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 SLC46A3Q7Z3Q1 461 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 KLBQ86Z14 1044 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ATP6V1C2Q8NEY4 427 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ASB16Q96NS5 453 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ACTRT3Q9BYD9 372 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 SLC6A17Q9H1V8 727 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 DZANK1Q9NVP4 752 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 CNOT2Q9NZN8 540 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ZNF222Q9UK12 451 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 B3GNT3Q9Y2A9 372 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ATG4BQ9Y4P1 393 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 DNMT3AQ9Y6K1 912 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 TRBV5-3A0A0A0MS03 114 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 PLD2O14939 933 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 YY2O15391 372 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 RAE1P78406 368 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 SHC2P98077 582 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ELOAQ14241 798 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 OR2G6Q5TZ20 316 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 FRRS1Q6ZNA5 592 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 OR6T1Q8NGN1 323 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 PDXPQ96GD0 296 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 MRGPRX3Q96LB0 322 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 COQ7Q99807 217 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 NPIPA5A0A0B4J1W7 369 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 NPIPA7E9PJI5 369 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 KIAA0355O15063 1070 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 GREM1O60565 184 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 NPIPA8P0DM63 369 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 JUNDP17535 347 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 NDUFV2P19404 249 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ITGB8P26012 769 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ACVR2AP27037 513 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 XCR1P46094 333 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 CD83Q01151 205 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 E2F2Q14209 437 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 DEFB110Q30KQ9 67 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 FLYWCH1Q4VC44 716 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 METTL27Q8N6F8 245 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 SLC7A13Q8TCU3 470 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 RPRD1BQ9NQG5 326 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 THSD1Q9NS62 852 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 ING3Q9NXR8 418 aa11.65□□□□□ -0.54
TM9SF4-201ENST00000217315 DICER1Q9UPY3 1922 aaKnown RBP11.65□□□□□ -0.55
TM9SF4-201ENST00000217315 CD8B2A6NJW9 211 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC25A12O75746 678 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CD8BP10966 210 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PVRP15151 417 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC19A1P41440 591 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ZNF267Q14586 743 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PLBD1Q6P4A8 553 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ADAMTSL4Q6UY14 1074 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 FANK1Q8TC84 345 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 C7orf34Q96L11 122 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SAMD8Q96LT4 415 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PRRC1Q96M27 445 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 AMDHD1Q96NU7 426 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 GSDMCQ9BYG8 508 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SAP130Q9H0E3 1048 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 GABARAPL1Q9H0R8 117 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 OR52A5Q9H2C5 316 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SP140LQ9H930 580 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 IL21RQ9HBE5 538 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 MKKSQ9NPJ1 570 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PMF1-BGLAPU3KQ54 211 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 A0A1W2PQL4 384 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms