RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 INMTO95050 263 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 CAPZBP47756 277 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 GP2P55259 537 aaKnown RBP27.8■■■□□ 2.04
PABPN1-201ENST00000216727 SHC2P98077 582 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 CCDC103Q8IW40 242 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 TMEM52Q8NDY8 209 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 NR4A3Q92570 626 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 RHNO1Q9BSD3 238 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.8■■■□□ 2.04
PABPN1-201ENST00000216727 QRSL1Q9H0R6 528 aaKnown RBP27.8■■■□□ 2.04
PABPN1-201ENST00000216727 REV1Q9UBZ9 1251 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 FBXL21Q9UKT6 434 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 DOLKQ9UPQ8 538 aa27.8■■■□□ 2.04
PABPN1-201ENST00000216727 OSMP13725 252 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 IL9P15248 144 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 ACVR2AP27037 513 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 MAOBP27338 520 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 PRKAR1BP31321 381 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 CDC42P60953 191 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 HPCAP84074 193 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 FOXD4Q12950 439 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-201ENST00000216727 PGBD2Q6P3X8 592 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 DHRS4L2Q6PKH6 230 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 C17orf82Q86X59 251 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-201ENST00000216727 RORBQ92753 470 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 ARHGDIGQ99819 225 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 TRIM45Q9H8W5 580 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-201ENST00000216727 STARD5Q9NSY2 213 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 IMPAD1Q9NX62 359 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 PSORS1C1Q9UIG5 152 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 PLOD3O60568 738 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 MT-ND2P03891 347 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 UGT2B15P54855 530 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 RAB38P57729 211 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 ILKQ13418 452 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 EXOSC6Q5RKV6 272 aaKnown RBP27.79■■■□□ 2.04
PABPN1-201ENST00000216727 HMGN2P46Q86SG4 172 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 MCATQ8IVS2 390 aaKnown RBP27.79■■■□□ 2.04
PABPN1-201ENST00000216727 SPEM1Q8N4L4 309 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 FKBP10Q96AY3 582 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 GPN2Q9H9Y4 310 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-201ENST00000216727 ANKHQ9HCJ1 492 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 MAN2C1Q9NTJ4 1040 aa27.79■■■□□ 2.04
PABPN1-201ENST00000216727 SLC9B1P1A6NJY1 282 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 SRPX2O60687 465 aaPredicted RBP27.78■■■□□ 2.04
PABPN1-201ENST00000216727 LDB3O75112 727 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 NME6O75414 186 aaPredicted RBP27.78■■■□□ 2.04
PABPN1-201ENST00000216727 ZIC2O95409 532 aaPredicted RBP27.78■■■□□ 2.04
PABPN1-201ENST00000216727 PDX1P52945 283 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 RPL6Q02878 288 aaKnown RBP27.78■■■□□ 2.04
PABPN1-201ENST00000216727 PRTGQ2VWP7 1150 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 ARHGAP11BQ3KRB8 267 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 WDR53Q7Z5U6 358 aaPredicted RBP27.78■■■□□ 2.04
PABPN1-201ENST00000216727 DNAJC22Q8N4W6 341 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 ZNF675Q8TD23 568 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 CDS1Q92903 461 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 ZG16BQ96DA0 208 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 FKBP14Q9NWM8 211 aa27.78■■■□□ 2.04
PABPN1-201ENST00000216727 MPZL2O60487 215 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 CTSKP43235 329 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 ID2Q02363 134 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 TRMT12Q53H54 448 aaKnown RBP27.77■■■□□ 2.04
PABPN1-201ENST00000216727 SYT6Q5T7P8 510 aaPredicted RBP27.77■■■□□ 2.04
PABPN1-201ENST00000216727 FRRS1Q6ZNA5 592 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 AHSA2Q719I0 299 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 CAMKK1Q8N5S9 505 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 SLC9A6Q92581 669 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 MTHFD2LQ9H903 347 aaPredicted RBP27.77■■■□□ 2.04
PABPN1-201ENST00000216727 WARS2Q9UGM6 360 aaKnown RBP27.77■■■□□ 2.04
PABPN1-201ENST00000216727 SLC13A4Q9UKG4 626 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 SGK494L7N484 410 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 FCMRO60667 390 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 PROS1P07225 676 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 CCNA2P20248 432 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 MASP1P48740 699 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 MAPK10P53779 464 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 DEFB110Q30KQ9 67 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 PODNL1Q6PEZ8 512 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 VRK2Q86Y07 508 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 SDR16C5Q8N3Y7 309 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 SIMC1Q8NDZ2 872 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 TCTN2Q96GX1 697 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 FUNDC2Q9BWH2 189 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 PIGUQ9H490 435 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 ACOT13Q9NPJ3 140 aa27.77■■■□□ 2.04
PABPN1-201ENST00000216727 DUSP5Q16690 384 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 ZCCHC12Q6PEW1 402 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 CD300LDQ6UXZ3 194 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 SHISA5Q8N114 240 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 C1orf216Q8TAB5 229 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 COPS4Q9BT78 406 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 IFT52Q9Y366 437 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 CHST2Q9Y4C5 530 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 TMEM131Q92545 1883 aa27.76■■■□□ 2.03
PABPN1-201ENST00000216727 CLCA1A8K7I4 914 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 SOX1O00570 391 aaPredicted RBP27.75■■■□□ 2.03
PABPN1-201ENST00000216727 ACP2P11117 423 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 MAP2K4P45985 399 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 NXPH1P58417 271 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 PRICKLE4Q2TBC4 344 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms