RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OR51A7Q8NH64 312 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 NODALQ96S42 347 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZNF160Q9HCG1 818 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 SPHK1Q9NYA1 384 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 CCDC187A0A096LP49 1063 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 IGHV3-20A0A0C4DH32 117 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 J3QLW9 94 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 HSPA12AO43301 675 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 MT-CO3P00414 261 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 HMGN1P05114 100 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZNF19P17023 458 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 CDHR3Q6ZTQ4 885 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 TM9SF2Q99805 663 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 TSPAN10Q9H1Z9 355 aaPredicted RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 MAST2Q6P0Q8 1798 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 PCP4L1A6NKN8 68 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 PSKH1P11801 424 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 UQCRC1P31930 480 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 PAPD4Q6PIY7 484 aaKnown RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 HOXD1Q9GZZ0 328 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 MUC13Q9H3R2 512 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 NPIPA5A0A0B4J1W7 369 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 NPIPA7E9PJI5 369 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 NPIPA8P0DM63 369 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 HSD3B1P14060 373 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 RPS3P23396 243 aaKnown RBP eCLIP13.01□□□□□ -0.33
SIX4-201ENST00000216513 HSD3B2P26439 372 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 TLE3Q04726 772 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 GRHL2Q6ISB3 625 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 FBXO42Q6P3S6 717 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZNF548Q8NEK5 533 aaPredicted RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 AP3S1Q92572 193 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 FUBP1Q96AE4 644 aaKnown RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 CFHR5Q9BXR6 569 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZNF71Q9NQZ8 489 aaPredicted RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 MYH7P12883 1935 aa13□□□□□ -0.33
SIX4-201ENST00000216513 SOCS2O14508 198 aa13□□□□□ -0.33
SIX4-201ENST00000216513 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
SIX4-201ENST00000216513 OR2L3Q8NG85 312 aa13□□□□□ -0.33
SIX4-201ENST00000216513 PITX2Q99697 317 aa13□□□□□ -0.33
SIX4-201ENST00000216513 GNG8Q9UK08 70 aa13□□□□□ -0.33
SIX4-201ENST00000216513 SPAARA0A1B0GVQ0 90 aa13□□□□□ -0.33
SIX4-201ENST00000216513 H3BSA7 217 aa13□□□□□ -0.33
SIX4-201ENST00000216513 DDAH2O95865 285 aa13□□□□□ -0.33
SIX4-201ENST00000216513 SLC15A1P46059 708 aa13□□□□□ -0.33
SIX4-201ENST00000216513 KIAA1024LP59773 190 aa13□□□□□ -0.33
SIX4-201ENST00000216513 TSPAN5P62079 268 aa13□□□□□ -0.33
SIX4-201ENST00000216513 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
SIX4-201ENST00000216513 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
SIX4-201ENST00000216513 OR2L8Q8NGY9 312 aa13□□□□□ -0.33
SIX4-201ENST00000216513 AGAP4Q96P64 663 aa13□□□□□ -0.33
SIX4-201ENST00000216513 DEFB127Q9H1M4 99 aa13□□□□□ -0.33
SIX4-201ENST00000216513 MYEF2Q9P2K5 600 aaKnown RBP13□□□□□ -0.33
SIX4-201ENST00000216513 SEMA3DO95025 777 aa13□□□□□ -0.33
SIX4-201ENST00000216513 GPR143P51810 404 aa13□□□□□ -0.33
SIX4-201ENST00000216513 AQP11Q8NBQ7 271 aa13□□□□□ -0.33
SIX4-201ENST00000216513 CXorf21Q9HAI6 301 aa13□□□□□ -0.33
SIX4-201ENST00000216513 SRA1Q9HD15 236 aaKnown RBP13□□□□□ -0.33
SIX4-201ENST00000216513 PCDHGA8Q9Y5G5 932 aa13□□□□□ -0.33
SIX4-201ENST00000216513 H2BFMP0C1H6 154 aa13□□□□□ -0.33
SIX4-201ENST00000216513 TFPTP0C1Z6 253 aa13□□□□□ -0.33
SIX4-201ENST00000216513 CKMT1AP12532 417 aa13□□□□□ -0.33
SIX4-201ENST00000216513 CYB561P49447 251 aa13□□□□□ -0.33
SIX4-201ENST00000216513 PIGWQ7Z7B1 504 aa13□□□□□ -0.33
SIX4-201ENST00000216513 JAGN1Q8N5M9 183 aa13□□□□□ -0.33
SIX4-201ENST00000216513 CENPNQ96H22 339 aaPredicted RBP13□□□□□ -0.33
SIX4-201ENST00000216513 TSSK6Q9BXA6 273 aa13□□□□□ -0.33
SIX4-201ENST00000216513 PIGUQ9H490 435 aa13□□□□□ -0.33
SIX4-201ENST00000216513 ZNF879B4DU55 563 aa13□□□□□ -0.33
SIX4-201ENST00000216513 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
SIX4-201ENST00000216513 ZNF789Q5FWF6 425 aa13□□□□□ -0.33
SIX4-201ENST00000216513 CD200R1Q8TD46 325 aa13□□□□□ -0.33
SIX4-201ENST00000216513 FAM240BA0A1B0GVZ2 78 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 MTRF1O75570 445 aaKnown RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 OPRD1P41143 372 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ZNF140P52738 457 aaPredicted RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ARFRP1Q13795 201 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 OR7A5Q15622 319 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 TECRLQ5HYJ1 363 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 SNX29P2Q8IUI4 249 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 RNF175Q8N4F7 328 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 PGAM5Q96HS1 289 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ERMAPQ96PL5 475 aaPredicted RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 ING4Q9UNL4 249 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 SCGB1D2O95969 90 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 DSG2Q14126 1118 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ABHD12BQ7Z5M8 362 aaPredicted RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 NINJ1Q92982 152 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 BMFQ96LC9 184 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 EMC9Q9Y3B6 208 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 B4GAT1O43505 415 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 LCKP06239 509 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms