RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GGT2P36268 569 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 RPS13P62277 151 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 CYCSP99999 105 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 SMN1Q16637 294 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 LRRC26Q2I0M4 334 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 LRRTM4Q86VH4 590 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ZNF527Q8NB42 609 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 TMEM145Q8NBT3 493 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 OR2AP1Q8NGE2 309 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 HMGB4Q8WW32 186 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 FYTTD1Q96QD9 318 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 HERPUD2Q9BSE4 406 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 C11orf54Q9H0W9 315 aaPredicted RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 RBFOX1Q9NWB1 397 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 GPR52Q9Y2T5 361 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 C10orf71Q711Q0 1435 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PEX10O60683 326 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ADAM23O75077 832 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PFKMP08237 780 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 HSD3B1P14060 373 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 CXCR1P25024 350 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 NUDT1P36639 197 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ACTBP60709 375 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ACTG1P63261 375 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 UBXN2BQ14CS0 331 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 TCTE1Q5JU00 501 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PRAMEF14Q5SWL7 426 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 TIGD3Q6B0B8 471 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 FBXL22Q6P050 247 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ZNF585AQ6P3V2 769 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ZER1Q7Z7L7 766 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 IQCF1Q8N6M8 205 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 CAMKVQ8NCB2 501 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 NANPQ8TBE9 248 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 NECTIN4Q96NY8 510 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PSD2Q9BQI7 771 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 BCO2Q9BYV7 579 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 C19orf12Q9NSK7 152 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 SDHAF2Q9NX18 166 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 UTS2RQ9UKP6 389 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 CACNG3O60359 315 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 SULT1C4O75897 302 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 MAS1P04201 325 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ERCC1P07992 297 aaPredicted RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 HSD11B1P28845 292 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 NDUFA6P56556 154 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 SEMG2Q02383 582 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 MFSD13AQ14CX5 517 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ALKBH2Q6NS38 261 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PXT1Q8NFP0 134 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 OR9Q2Q8NGE9 314 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PXYLP1Q8TE99 480 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ZNF419Q96HQ0 510 aaPredicted RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 FBXL18Q96ME1 805 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 HIST1H2AAQ96QV6 131 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 RETREG1Q9H6L5 497 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 TMPRSS11EQ9UL52 423 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 TRAV20A0A0B4J274 112 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 ADAM10O14672 748 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PRICKLE3O43900 615 aaPredicted RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 ADAP00813 363 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 GJA1P17302 382 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 RPS24P62847 133 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 SORDQ00796 357 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 GALNT2Q10471 571 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 GAS6Q14393 721 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PTPRCAPQ14761 206 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 MICAQ29983 383 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 DCST2Q5T1A1 773 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 FAM122BQ7Z309 247 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 SCLYQ96I15 445 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 SHDQ96IW2 340 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 MICU1Q9BPX6 476 aa9.95□□□□□ -0.82
VCL-201ENST00000211998 SORBS1Q9BX66 1292 aaKnown RBP9.95□□□□□ -0.82
VCL-201ENST00000211998 ZNF821O75541 412 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 JRKO75564 520 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 BEST1O76090 585 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 TNFP01375 233 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 CYP17A1P05093 508 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 PIM1P11309 404 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 OSMP13725 252 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 CASRP41180 1078 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 RAB4BP61018 213 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 TANGO2Q6ICL3 276 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ZNF280BQ86YH2 543 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ZDHHC14Q8IZN3 488 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 KCT2Q8NC54 265 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 RHEBL1Q8TAI7 183 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 GGHQ92820 318 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 SMARCD2Q92925 531 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 OR51B5Q9H339 312 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 SERINC1Q9NRX5 453 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 UBR1Q8IWV7 1749 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 TRAV18A0A075B6X5 111 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 AIPO00170 330 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 HOXC11O43248 304 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 ZNF780AO75290 641 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms