RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 A8MUA0 341 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 KLF8O95600 359 aaPredicted RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 MT-ND2P03891 347 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 H1F0P07305 194 aaKnown RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 MPIP34949 423 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 GJA4P35212 333 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 XKP51811 444 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 CRISP3P54108 245 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 STXBP1P61764 594 aaKnown RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 FCHO2Q0JRZ9 810 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 ZNF155Q12901 538 aaPredicted RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 SLC13A2Q13183 592 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 NNATQ16517 81 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 EXOC3L2Q2M3D2 409 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 SMU1Q2TAY7 513 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 C2orf76Q3KRA6 126 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 AMZ1Q400G9 498 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 RUNDC3AQ59EK9 446 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 COQ5Q5HYK3 327 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 ANKRD34AQ69YU3 496 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 HMBOX1Q6NT76 420 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 USP30Q70CQ3 517 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 TCEANCQ8N8B7 351 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 CAPSLQ8WWF8 208 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 GEMIN6Q8WXD5 167 aaKnown RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 GATAD2BQ8WXI9 593 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 EID2BQ96D98 161 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 DNAJA3Q96EY1 480 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 LRIG1Q96JA1 1093 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 FCRL4Q96PJ5 515 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 MYADMQ96S97 322 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 FAM129BQ96TA1 746 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 PSD2Q9BQI7 771 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 SLC2A11Q9BYW1 496 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 POLR2J2Q9GZM3 115 aaKnown RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 NAA50Q9GZZ1 169 aaKnown RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 PCBD2Q9H0N5 130 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 TTYH1Q9H313 450 aaPredicted RBP4.67□□□□□ -1.66
CDH17-201ENST00000027335 TBC1D17Q9HA65 648 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 TM7SF3Q9NS93 570 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 FAIMQ9NVQ4 179 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 HSFX1Q9UBD0 423 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 IL20RAQ9UHF4 553 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 BTBD3Q9Y2F9 522 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 PCDHGA10Q9Y5H3 936 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 PCDHA9Q9Y5H5 950 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 ST14Q9Y5Y6 855 aa4.67□□□□□ -1.66
CDH17-201ENST00000027335 CACNA1IQ9P0X4 2223 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SERTM2A0A1B0GWG4 89 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 OTOL1A6NHN0 477 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 CLDN25C9JDP6 229 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 LOC110117498-PIK3R3F6TDL0 507 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SCAMP2O15127 329 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 SMAD9O15198 467 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 SLC16A5O15375 505 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 CAPN5O15484 640 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 CYTIPO60759 359 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 B4GALT2O60909 372 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 CKMT1AP12532 417 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 PRKCAP17252 672 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 PSMA1P25786 263 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 AK4P27144 223 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 G0S2P27469 103 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SLAMF1Q13291 335 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SMN1Q16637 294 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 IQCCQ4KMZ1 466 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 ZNF311Q5JNZ3 666 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 COLEC12Q5KU26 742 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 RBM48Q5RL73 367 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 TRIQKQ629K1 86 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 GTF2IRD2BQ6EKJ0 949 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 REEP3Q6NUK4 255 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 C6orf120Q7Z4R8 191 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 WDR53Q7Z5U6 358 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 GTF2IRD2Q86UP8 949 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 CHERPQ8IWX8 916 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 METTL27Q8N6F8 245 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 COX18Q8N8Q8 333 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 OR9Q2Q8NGE9 314 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 C16orf78Q8WTQ4 265 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 THRSPQ92748 146 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 FGF14Q92915 247 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 ZNF707Q96C28 371 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 RSPRY1Q96DX4 576 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SPACA9Q96E40 222 aaPredicted RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 DTD2Q96FN9 168 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 PDLIM5Q96HC4 596 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 ZNF347Q96SE7 839 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 ATP6V0BQ99437 205 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 DOHHQ9BU89 302 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 ANKRD60Q9BZ19 345 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 CPEB1Q9BZB8 566 aaKnown RBP4.66□□□□□ -1.66
CDH17-201ENST00000027335 BTBD1Q9H0C5 482 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 P2RY12Q9H244 342 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 PRDM8Q9NQV8 689 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SARDHQ9UL12 918 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 SSR3Q9UNL2 185 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 ABCG2Q9UNQ0 655 aa4.66□□□□□ -1.66
CDH17-201ENST00000027335 GSTK1Q9Y2Q3 226 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms