RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 VCX3AQ9NNX9 186 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 LRIT1Q9P2V4 623 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 PCDHGA6Q9Y5G7 932 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 IGHV5-51A0A0C4DH38 117 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 A0A1B0GVT2 93 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 HYKKA2RU49 373 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 H3BSA7 217 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 CTNSO60931 367 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 MED26O95402 600 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 AK1P00568 194 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 GUSBP08236 651 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 ACP2P11117 423 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 AGXTP21549 392 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 NT5EP21589 574 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 FUT4P22083 530 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 PAX7P23759 505 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 EEF1B2P24534 225 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 ELAVL4P26378 380 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 MLLT3P42568 568 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 GFERP55789 205 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 SH3BGRP55822 239 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 HPCAP84074 193 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 ID2Q02363 134 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 MAP4K2Q12851 820 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 DUSP5Q16690 384 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF311Q5JNZ3 666 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 DCST1Q5T197 706 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 MLIPQ5VWP3 458 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 FRRS1Q6ZNA5 592 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 B3GNT8Q7Z7M8 397 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 RBM45Q8IUH3 476 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF595Q8IYB9 648 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC25A45Q8N413 288 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 AQP11Q8NBQ7 271 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 VANGL1Q8TAA9 524 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 CDS1Q92903 461 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 PRRC1Q96M27 445 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 TGM7Q96PF1 710 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 WFDC6Q9BQY6 131 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 DGCR6LQ9BY27 220 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 SAP130Q9H0E3 1048 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 POLR1BQ9H9Y6 1135 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 PTTG2Q9NZH5 202 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 RHCGQ9UBD6 479 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 CLCA2Q9UQC9 943 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 MRPS33Q9Y291 106 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 IFT52Q9Y366 437 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 TPRKBQ9Y3C4 175 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 PCDHGB1Q9Y5G3 927 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 CACNA1IQ9P0X4 2223 aa13.38□□□□□ -0.27
RTFDC1-201ENST00000023939 IGHV1OR21-1A0A087WYE8 117 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 A0A0A6YYC8 382 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 I3L1I5 382 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 M0R3H8 397 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 UGT2B17O75795 530 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 HTR1AP08908 422 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 ALOX5P09917 674 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 FNTBP49356 437 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 PDX1P52945 283 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 MED25Q71SY5 747 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 OLIG3Q7RTU3 272 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 ABCA7Q8IZY2 2146 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 SPARTQ8N0X7 666 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 OR6T1Q8NGN1 323 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 CNIH3Q8TBE1 160 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF350Q9GZX5 532 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 RSL24D1Q9UHA3 163 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-201ENST00000023939 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 H0YIG0 161 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 FCMRO60667 390 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 COQ9O75208 318 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 GASTP01350 101 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 THBS1P07996 1170 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 TDGF1P13385 188 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 GLB1P16278 677 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC35A2P78381 396 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 GPLD1P80108 840 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 TUBA3CQ13748 450 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 GRM7Q14831 915 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SHBQ15464 509 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 NPTX1Q15818 432 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 XAF1Q6GPH4 301 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 TYW3Q6IPR3 259 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 CD300LDQ6UXZ3 194 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 B3GNT6Q6ZMB0 384 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 C11orf74Q86VG3 221 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 WDR5BQ86VZ2 330 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SHISA5Q8N114 240 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SIMC1Q8NDZ2 872 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SDF2Q99470 211 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ELF4Q99607 663 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 FNDC11Q9BVV2 318 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ANKRD19PQ9H560 264 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 CCNB1IP1Q9NPC3 277 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms