RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm8251F6VUT6 1994 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm5565A0A0G2JGB2 317 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm17615E9Q9P2 165 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn2r9K7N6Z8 848 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mknk1O08605 427 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ppp1caP62137 330 aaKnown RBP14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Eif4e2Q8BMB3 245 aaKnown RBP14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Zcchc3Q8BPK2 400 aaKnown RBP14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 B4gat1Q8BWP8 415 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Fbxl22Q8C7B6 236 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Trim31Q8R0K2 507 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 St3gal4Q91Y74 333 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Chchd2Q9D1L0 153 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Stx11Q9D3G5 287 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mid2Q9QUS6 705 aa14.96□□□□□ -0.01
Trim39-203ENSMUST00000113706 A0A286YCH8 300 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 3110040M04RikA0A286YDK0 300 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 A0A286YE43 300 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Xlr5aA2BI45 236 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Kcnmb3E9Q7U0 239 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr631F8VPJ9 319 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Gm4141K9J7H2 306 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Fpr-s1O08790 351 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Gpr50O88495 591 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 PlauP06869 433 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 AcadmP45952 421 aaKnown RBP14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Ica1P97411 478 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 B3gnt4Q1RLK6 350 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 AktipQ64362 292 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Tra2aQ6PFR5 281 aaKnown RBP14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Eml2Q7TNG5 649 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Fam131aQ8BWU3 361 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Lpcat2Q8BYI6 544 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Prkd3Q8K1Y2 889 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 LsrQ99KG5 594 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Lpcat2bQ9D5U0 516 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Nrg4Q9WTX4 115 aa14.96□□□□□ -0.02
Trim39-203ENSMUST00000113706 Bdp1Q571C7 2467 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Ttc39aA2ACP1 578 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr1247A2AT78 314 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Gm10608E9PZ13 166 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Prr22F6TNE3 422 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Slc6a2O55192 617 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Dnajb5O89114 348 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Brf2Q3UAW9 420 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Q8BH50 245 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Slc38a4Q8R1S9 547 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Upk3bl1Q9D701 249 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Nr4a3Q9QZB6 627 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 HelzQ6DFV5 1964 aaKnown RBP14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Klk1b16P04071 261 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Hsd3b1P24815 373 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Atxn1P54254 791 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 PhexP70669 749 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Rgs14P97492 547 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr12Q60894 333 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Dsg4Q7TMD7 1041 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr857Q7TRF7 309 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Erich5Q8K0S2 362 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Fam20bQ8VCS3 409 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr347Q8VGK2 312 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr447Q8VGP6 310 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Ccdc77Q9CZH8 489 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Sp2Q9D2H6 612 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Wdr5bQ9D7H2 328 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 1700069L16RikQ9D9H5 109 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 GabarapQ9DCD6 117 aa14.95□□□□□ -0.02
Trim39-203ENSMUST00000113706 Vmn1r77E9PY60 306 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Dync1i2O88487 612 aaKnown RBP14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Bcl2a1bQ497M6 172 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Ccdc85bQ6PDY0 202 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Trim46Q7TNM2 759 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Stbd1Q8C7E7 338 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Spns1Q8R0G7 528 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Pex12Q8VC48 359 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Cela1Q91X79 266 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Nkd1Q99MH6 471 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Armc8Q9DBR3 673 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Tas2r103Q9JKA3 312 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Mbd4Q9Z2D7 554 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr625-ps1A0A140T8L4 321 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Gm6592A2AHC7 168 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Gm14399A2ARW8 610 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Aadacl2B2RWD2 401 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 A430033K04RikE9Q8G5 680 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Vmn2r52L7N2B2 852 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Lrrc23O35125 340 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Bcl2a1dO55179 172 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Nup43P59235 380 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Zc3hav1Q3UPF5 946 aaKnown RBP14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Krt76Q3UV17 594 aaKnown RBP14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Trp53i11Q4QQM4 189 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Taar7dQ5QD10 358 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 MertkQ60805 994 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Prkg2Q61410 762 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Fgl1Q71KU9 314 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr1318Q7TQW6 320 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Abhd16bQ80YU0 474 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr1317Q8VF84 316 aa14.94□□□□□ -0.02
Trim39-203ENSMUST00000113706 Olfr617Q8VGA1 318 aa14.94□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms