RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Adat1Q9JHI2 499 aa21.31■■□□□ 1
Scn1b-201ENSMUST00000098548 Nova1Q9JKN6 507 aaKnown RBP21.31■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr1089A0A1L1SRK6 311 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Zfp300A2AE21 645 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Xlr5aA2BI45 236 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Vmn2r97K7N6Z2 861 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Vmn2r93L7N1Z9 857 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 UgdhO70475 493 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 P01637 128 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 MagP20917 626 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Dnaja1P63037 397 aaKnown RBP21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Csrp1P97315 193 aaKnown RBP21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Patl1Q3TC46 770 aaKnown RBP21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Pin1rt1Q3ULQ2 159 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr814Q7TRH4 310 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Reep1Q8BGH4 201 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 PpcdcQ8BZB2 204 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Piwil2Q8CDG1 971 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Gulp1Q8K2A1 304 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Gabarapl1Q8R3R8 117 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Irak4Q8R4K2 459 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Ak5Q920P5 562 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Dnase1l2Q9D1G0 278 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 Tcf23Q9JLR5 209 aa21.3■■□□□ 1
Scn1b-201ENSMUST00000098548 SmoktcrA2KF29 484 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Gm10477F6SW83 55 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Rnf148G3X9R7 316 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Gm4141K9J7H2 306 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Vmn2r31L7N1Z4 861 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 KeraO35367 351 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Csnk2a2O54833 350 aaKnown RBP21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Dok2O70469 412 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Psmb9P28076 219 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 StarP51557 284 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Jak1P52332 1153 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Pold1P52431 1105 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Tas2r7P59530 312 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Arf3P61205 181 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Cct3P80318 545 aaKnown RBP21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Vwa5b2Q3UR50 1248 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Abcb7Q61102 752 aaKnown RBP21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Vsx2Q61412 361 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Krt72Q6IME9 520 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Gramd2bQ6PEM6 445 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Doc2aQ7TNF0 405 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Otop1Q80VM9 600 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Snx16Q8C080 344 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 BicralQ8CHH5 1074 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Slc35b4Q8CIA5 331 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Fmo2Q8K2I3 535 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Ubqln1Q8R317 582 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr818Q8VG46 318 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr569Q8VGZ2 314 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Hint3Q9CPS6 165 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Fam32aQ9CR80 112 aaKnown RBP21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Psg23Q9D2U0 471 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Mrpl19Q9D338 292 aaKnown RBP21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Psg21Q9DAV5 471 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Srebf1Q9WTN3 1134 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Srpk3Q9Z0G2 565 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Zscan12Q9Z1D7 501 aa21.29■■□□□ 1
Scn1b-201ENSMUST00000098548 Ascc3E9PZJ8 2198 aaKnown RBP21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Pde4dipQ80YT7 2224 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Zfp738B8JJX8 793 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr741L7N1Y5 311 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Hspa1bP17879 642 aaKnown RBP21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Mc3rP33033 323 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 St3gal2Q11204 350 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Zfp935Q14DI0 353 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Ugt2b36Q3UEP4 530 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Eif2s1Q6ZWX6 315 aaKnown RBP21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Csnk1g2Q8BVP5 415 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Ikzf4Q8C208 586 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Lrrc61Q8R2R5 259 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Cdt1Q8R4E9 557 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Fars2Q99M01 451 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Ska1Q9CPV1 254 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Prdm5Q9CXE0 599 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Dtwd2Q9D0U1 298 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Tmem225Q9D9S2 230 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Armc8Q9DBR3 673 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Vmn1r52Q9EP79 309 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Defb5Q9EPV9 64 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 B3galt5Q9JI67 308 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Hspb3Q9QZ57 154 aa21.28■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr675A0A1B0GSE1 317 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 4932443I19RikA0A286YE38 169 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Pramef20B1ARV6 477 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Ptrhd1D3Z4S3 140 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Vmn2r90E9PXJ8 863 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Kbtbd6E9PYD7 486 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 A530032D15RikE9Q422 215 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Kbtbd7G5E8C2 690 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Man2b2O54782 1018 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 CtsaP16675 474 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Tuba1cP68373 449 aaKnown RBP21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Pfkfb2P70265 519 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Kctd21Q3URF8 260 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Clca4bQ3UW98 925 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Egfl8Q6GUQ1 293 aa21.27■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms