RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 AcoxlQ9DBS4 632 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc35a2Q9R0M8 390 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nr1h5E9Q5A6 505 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm527Q4KL13 310 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pabpc2Q62029 628 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Utp15Q8C7V3 528 aaKnown RBP15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gorasp1Q91X51 446 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rad51cQ924H5 366 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Apbb2Q9DBR4 760 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mtm1Q9Z2C5 603 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pex10B1AUE5 324 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Per1O35973 1291 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Sox1P53783 391 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nkx3-2P97503 333 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 HepacamQ640R3 418 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Hmgcs1Q8JZK9 520 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pink1Q99MQ3 580 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lap3Q9CPY7 519 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cyb5bQ9CQX2 146 aaKnown RBP15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Q9DA42 136 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 SnapinQ9Z266 136 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm16368A0A1Y7VNG9 144 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Bloc1s1O55102 125 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tmem14aP56983 99 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc45a4Q0P5V9 785 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm5416Q6IE28 97 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 DgkbQ6NS52 802 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Trib2Q8K4K3 343 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr846Q8VET8 312 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rnh1Q91VI7 456 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rgs6Q9Z2H2 472 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pgap3A2A559 320 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vmn2r107E9PZJ7 861 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mccc2Q3ULD5 563 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pced1aQ6P1Z5 449 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cdc123Q8CII2 336 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr850Q8VFF2 315 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Dnajc18Q9CZJ9 357 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cntn6Q9JMB8 1028 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Obp1bA2AEP0 171 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm14743A2BHD2 171 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lrrn4P59383 733 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Sec22cQ8BXT9 303 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 AmtQ8CFA2 403 aaKnown RBP15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Psmd8Q9CX56 353 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 NoctO35710 429 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ring1O35730 406 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cxcl12P40224 93 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Aup1P70295 410 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Q3U7U4 132 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 HrQ61645 1182 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tvp23aQ6NVH0 222 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc35f2Q7TML3 375 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Zfp3Q8BLB0 497 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lpcat3Q91V01 487 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Txnrd2Q9JLT4 524 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vamp5Q9Z2P8 102 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1153A2AVC0 318 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Coq10aE9Q3H6 259 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Abcb1aP21447 1276 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rnf215Q5SPX3 379 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr437Q8VEV1 310 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 LipfQ9CPP7 395 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Dhrs7Q9CXR1 338 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr930Q9EQ99 308 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pdzk1Q9JIL4 519 aa15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rfc2Q9WUK4 349 aaKnown RBP15.87■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm3604A0A087WPN2 559 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tcte1A6H639 498 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Enthd1E9Q1Z2 618 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Omt2aF6ZJR3 104 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm8888J3QPX5 126 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tnfrsf11aO35305 625 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tssk2O54863 358 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Bcl2l11O54918 196 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rps24P62849 133 aaKnown RBP15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ephx3Q3V1F8 367 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nsg1Q62092 185 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mat1aQ91X83 396 aaKnown RBP15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 S100a16Q9D708 124 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Spag4Q9JJF2 443 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cntnap1O54991 1385 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ccr7P47774 378 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Spag8Q3V0Q6 470 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cnih3Q6ZWS4 160 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr270Q7TS19 314 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 GmdsQ8K0C9 372 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cables2Q8K3M5 476 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Elac1Q8VEB6 362 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rhox2dW4VSN9 191 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Hsf1P38532 525 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ptpn2Q06180 406 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 AntxrlQ8BVM2 641 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pcdhga3Q91XY5 928 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Dph2Q9CR25 489 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fezf2Q9ESP5 455 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tcrg-C4A0A075B6C7 190 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1215A3KGY3 312 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm12790B1AUV6 201 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm3727J3QM54 205 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms