RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cacng3Q9JJV5 315 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Foxe3Q9QY14 288 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 B4galt2Q9Z2Y2 369 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm43796A0A0J9YV32 372 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm12695A2AGB2 545 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 4930595M18RikA2RRY9 829 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r88E9Q235 316 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Man2b2O54782 1018 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 AmbnO55189 407 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Wdr5P61965 334 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Acta2P62737 377 aaKnown RBP9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Actg2P63268 376 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ccser2Q3UHI0 833 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cldn34b4Q3V0X2 211 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cnot2Q8C5L3 540 aaKnown RBP9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 EdaraddQ8VHX2 208 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mrgprb3Q91ZC1 312 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mrgpra5Q91ZC7 304 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GmfbQ9CQI3 142 aa9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PpieQ9QZH3 301 aaKnown RBP9.81□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Igkv10-96A0A140T8M1 115 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam46aD3Z5S8 447 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm8020F6WLE9 229 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Omt2aF6ZJR3 104 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 FhitO89106 150 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 C4bpaP08607 469 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GhrhrP32082 423 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dsc3P55850 896 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm5416Q6IE28 97 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pgm2Q7TSV4 620 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lrrtm2Q8BGA3 515 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bnc2Q8BMQ3 1127 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fastkd3Q8BSN9 661 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Abhd18Q8C1A9 464 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ly6g5cQ8K1T5 149 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr985Q8VGB4 311 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mcoln1Q99J21 580 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm42372A0A1B0GT27 204 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Skint10A7TZG1 354 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cyp4a31F8WGU9 509 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cyp2j8G3UZ38 503 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Phox2bO35690 314 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 TyrP11344 533 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 RhoP15409 348 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Camk2bP28652 542 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 UqcrhP99028 89 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc26a10Q5EBI0 492 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Eif1aQ60872 144 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ttf1Q62187 859 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Irf4Q64287 450 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1477Q7TQQ7 315 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr503Q7TRU8 323 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Otop2Q80SX5 563 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 CblcQ80XL1 496 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lair1Q8BG84 263 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Peli2Q8BST6 419 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Itpk1Q8BYN3 419 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cpne5Q8JZW4 593 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Q8R3Y5 413 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rab7bQ8VEA8 199 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr729Q8VET4 323 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 As3mtQ91WU5 376 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hm13Q9D8V0 378 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tubb3Q9ERD7 450 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Serinc3Q9QZI9 472 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc7a5Q9Z127 512 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc7a7Q9Z1K8 510 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Acbd4E9Q289 327 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Galnt9G3X942 604 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Smad6O35182 495 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PthlhP22858 175 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PtnP63089 168 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ugt2b36Q3UEP4 530 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam109aQ8BH49 266 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gemin8Q8BHE1 238 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Klf8Q8BLM0 355 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gatad2aQ8CHY6 629 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Neto1Q8R4I7 533 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr448Q8VES9 310 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1469Q8VFW5 309 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Edem1Q925U4 652 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cypt12Q9DAR6 119 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Xylt2Q9EPL0 865 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zfp937A2ANU7 503 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 E9Q0B3 247 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm21103E9Q2Q1 267 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm8356J3QPD3 205 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dnajb3O35723 242 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 SrgnP13609 152 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr629Q0VBH3 314 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm8332Q3UTA4 144 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dcdc2Q5DU00 475 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PfplQ5RKV8 702 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r201Q8R262 300 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Klhl25Q8R2P1 589 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr350Q8VFP8 312 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr347Q8VGK2 312 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Wdr45Q91VM3 360 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 SharpinQ91WA6 380 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mrpl28Q9D1B9 257 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms