RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Teddm2Q208S0 260 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tssk1bQ61241 365 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sgpp2Q810K3 354 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Colec12Q8K4Q8 742 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vmn1r206Q8R277 312 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 PxnQ8VI36 591 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Spz1Q99MY0 378 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tmem179bQ9CY24 219 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sppl2aQ9JJF9 523 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Chd3B1AR17 2055 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm5141A0A0J9YUW3 581 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 SelenonD3Z2R5 557 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 4930455H04RikD3Z622 58 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr619E9PV95 320 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Bcl7cO08664 217 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cdk5r2O35926 369 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Aldh1a7O35945 501 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 P01807 119 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Wnt4P22724 351 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 SmsP97355 366 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Grxcr1Q50H32 290 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 MeikinQ5F2C3 434 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rbbp4Q60972 425 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 E330021D16RikQ8BW45 371 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sh3rf2Q8BZT2 735 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Mtrf1Q8K126 446 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr77Q8VEY9 312 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cd209aQ91ZX1 238 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Spg21Q9CQC8 308 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc7a7Q9Z1K8 510 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ilf3Q9Z1X4 898 aaKnown RBP10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cacna1bO55017 2327 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 PatjQ63ZW7 1834 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 HgdO09173 445 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 AurkcO88445 282 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zp2P20239 713 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gnb5P62881 395 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 FcamrQ2TB54 535 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Entpd7Q3TCT4 606 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Stox2Q499E5 926 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 MuskQ61006 868 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc6a7Q6PGE7 637 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cxcl3Q6W5C0 100 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Supv3l1Q80YD1 779 aaKnown RBP10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Plekhs1Q8BW88 474 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vmn1r52Q9EP79 309 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 PrelpQ9JK53 378 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp981A2A8V7 445 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr209L7N1X3 305 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 CkmP07310 381 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Glt8d2Q640P4 349 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Trim23Q8BGX0 574 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fam92aQ8BP22 355 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Atg13Q91YI1 516 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ssr2Q9CPW5 183 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 UqcrbQ9D855 111 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Izumo2Q9DA16 220 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tmem43Q9DBS1 400 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Prss16Q9QXE5 509 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ndrg3Q9QYF9 375 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 HnrnpdlQ9Z130 301 aaKnown RBP10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cep350E9Q309 3095 aa10.76□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cfap46E9Q2C0 2641 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm42372A0A1B0GT27 204 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Hoxd12P23812 268 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tspan5P62080 268 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tbpl1P62340 186 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fabp5Q05816 135 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Serpine2Q07235 397 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rnf149Q3U2C5 394 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ppp3r1Q63810 170 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zswim9Q6DI92 447 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Phf21aQ6ZPK0 659 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pik3ip1Q7TMJ8 264 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tmem184bQ8BG09 407 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Mmp28Q8CGV8 520 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vmn1r185Q8R299 319 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Igsf8Q8R366 611 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr656Q8VGX9 329 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc3a1Q91WV7 685 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 NtpcrQ9CQA9 190 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fam3bQ9D309 235 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Capns2Q9D7J7 247 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 B4galt6Q9WVK5 382 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 CN725425A0A087WRU1 652 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Trgv2A2J008 116 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tyw5A2RSX7 315 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rnf13O54965 381 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rpl3P27659 403 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Etv1P41164 477 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ephb3P54754 993 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 CamkmtQ3U2J5 323 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Commd6Q3V4B5 87 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ces5aQ6AW46 575 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tha1Q6XPS7 400 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr384Q7TRX8 312 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Kcnmb1Q8CAE3 191 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 RybpQ8CCI5 228 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm5591Q8CDK1 855 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr683Q8VGV1 319 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms