RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 HSDL2Q6YN16 418 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 SLC29A4Q7RTT9 530 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 KBTBD2Q8IY47 623 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 CDRT4Q8N9R6 151 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 OR52N2Q8NGI0 321 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 OR5L2Q8NGL0 311 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 OR5AK3PQ8NH89 298 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 C16orf52Q8NHV5 167 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 NUBPLQ8TB37 319 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 MIPOL1Q8TD10 442 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 TP53INP1Q96A56 240 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 MS4A4EQ96PG1 132 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 GPATCH1Q9BRR8 931 aaKnown RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 ACTRT3Q9BYD9 372 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 DEFB126Q9BYW3 111 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 C1orf21Q9H246 121 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 NANOGQ9H9S0 305 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 IL1RL2Q9HB29 575 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 GPATCH2Q9NW75 528 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 NDE1Q9NXR1 346 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 ZNF223Q9UK11 482 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 RAXQ9Y2V3 346 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 HEMK1Q9Y5R4 338 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 URB1O60287 2271 aaKnown RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 PCSK5Q92824 1860 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 C2orf92A0A1B0GVN3 265 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 K7ENP7 123 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 FXYD1O00168 92 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 HNRNPCL1O60812 293 aaKnown RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 GPX2P18283 190 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 PPICP45877 212 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 FOXK2Q01167 660 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 Q0VFX4 171 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 CHAF1BQ13112 559 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 TP53BP2Q13625 1128 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 EXOSC6Q5RKV6 272 aaKnown RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 ATP1A1-AS1Q5TC04 95 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 CDC73Q6P1J9 531 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 INO80CQ6PI98 192 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 C16orf89Q6UX73 402 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 DNAJC14Q6Y2X3 702 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 C9orf40Q8IXQ3 194 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 CLEC4FQ8N1N0 589 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 AMER2Q8N7J2 671 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 C17orf47Q8NEP4 570 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 OR8J3Q8NGG0 315 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 ZCCHC14Q8WYQ9 949 aaKnown RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 ADIPOR1Q96A54 375 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 C16orf58Q96GQ5 468 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 SLC35G5Q96KT7 338 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 LMF2Q9BU23 707 aaKnown RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 FOLH1BQ9HBA9 442 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 FAF1Q9UNN5 650 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 CORO2BQ9UQ03 480 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 AP3M1Q9Y2T2 418 aa11.43□□□□□ -0.58
LINC00339-213ENST00000642137 GPR55Q9Y2T6 319 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-213ENST00000642137 C15orf38-AP3S2A0A0A6YYH1 394 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 TRBV11-1A0A0K0K1C0 115 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ARGFXA6NJG6 315 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 MASP2O00187 686 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 NKX2-2O95096 273 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 PRKAR1AP10644 381 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ITGAMP11215 1152 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 DRD5P21918 477 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 SLC6A2P23975 617 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 MAN2A2P49641 1150 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 RASSF2P50749 326 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 MVDP53602 400 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 PSME3P61289 254 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 MXRA7P84157 204 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 PSG6Q00889 435 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 FADDQ13158 208 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 CAPRIN1Q14444 709 aaKnown RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 LASP1Q14847 261 aaKnown RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 EBPQ15125 230 aaKnown RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 RGNQ15493 299 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ZNHIT3Q15649 155 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 MFSD12Q6NUT3 480 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 RINLQ6ZS11 566 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 CCDC121Q6ZUS5 278 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 SZRD1Q7Z422 152 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ARPINQ7Z6K5 226 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 RNF130Q86XS8 419 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 PGAM4Q8N0Y7 254 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ARMC10Q8N2F6 343 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 KIF2BQ8N4N8 673 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 CLEC1AQ8NC01 280 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 HSPBAP1Q96EW2 488 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 LCORQ96JN0 433 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 VSTM2LQ96N03 204 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 STACQ99469 402 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms