RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MDC1Q14676 2089 aaKnown RBP16.14■□□□□ 0.17
PHGDH-234ENST00000642041 A0A1W2PR48 441 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 TTC36A6NLP5 189 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 PLOD2O00469 737 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 CLDN4O14493 209 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 GALR3O60755 368 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 CTSVO60911 334 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 TIPRLO75663 272 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 SERPINA1P01009 418 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF888P0CJ79 500 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ARAFP10398 606 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 NCK1P16333 377 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 MAGEA2P43356 314 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 AVPR1BP47901 424 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 PPM1FP49593 454 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ARL4DP49703 201 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 KHKP50053 298 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 NCBP2P52298 156 aaKnown RBP eCLIP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 MRPS35P82673 323 aaKnown RBP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 SCARB2Q14108 478 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 GRM7Q14831 915 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ANKRD26P1Q6NSI1 321 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 WDR74Q6RFH5 385 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 MED25Q71SY5 747 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 C6orf120Q7Z4R8 191 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ARMC8Q8IUR7 673 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 LILRA2Q8N149 483 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 NR4A3Q92570 626 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF597Q96LX8 424 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 SEPHS2Q99611 448 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 DOHHQ9BU89 302 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF768Q9H5H4 540 aaKnown RBP16.13■□□□□ 0.17
PHGDH-234ENST00000642041 PIF1Q9H611 641 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 SLC6A13Q9NSD5 602 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 NTMQ9P121 344 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 P2RX2Q9UBL9 471 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 CES1P1Q9UKY3 287 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 ATG4BQ9Y4P1 393 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 SNX8Q9Y5X2 465 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 RNF215Q9Y6U7 377 aa16.13■□□□□ 0.17
PHGDH-234ENST00000642041 MAGEA13PA6NCF6 341 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF891A8MT65 544 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 H0YIG0 161 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 PRKD3O94806 890 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 DDAH2O95865 285 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 CST1P01037 141 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 RNF224P0DH78 156 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 LIFP15018 202 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 GNLYP22749 145 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 COL8A1P27658 744 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 RAB38P57729 211 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 RAB8AP61006 207 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 MPEG1Q2M385 716 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 LPCAT4Q643R3 524 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 SPRED1Q7Z699 444 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 PTOV1Q86YD1 416 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 LRRC25Q8N386 305 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 KCT2Q8NC54 265 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 GALNT11Q8NCW6 608 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 CIDECQ96AQ7 238 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 AURKBQ96GD4 344 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 SORBS1Q9BX66 1292 aaKnown RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 BTBD2Q9BX70 525 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 CACYBPQ9HB71 228 aaKnown RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 TEX10Q9NXF1 929 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-234ENST00000642041 GIN1Q9NXP7 522 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 KCMF1Q9P0J7 381 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF639Q9UID6 485 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 FBXW2Q9UKT8 454 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 PADI2Q9Y2J8 665 aa16.12■□□□□ 0.17
PHGDH-234ENST00000642041 HIVEP3Q5T1R4 2406 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 A0A087WV62 115 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 AGRPO00253 132 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 SEMA7AO75326 666 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ERAL1O75616 437 aaKnown RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 RASAL1O95294 804 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 NSA2O95478 260 aaKnown RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 AIFM1O95831 613 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 AK1P00568 194 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 C9P02748 559 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 FABP3P05413 133 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF26P17031 533 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 TYRP1P17643 537 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 CERS1P27544 350 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ERFP50548 548 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 MVDP53602 400 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ARSFP54793 590 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 LIM2P55344 173 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 HSD11B2P80365 405 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ADRM1Q16186 407 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 PRTGQ2VWP7 1150 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ATAD3BQ5T9A4 648 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 TLDC1Q6P9B6 456 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 CEACAM20Q6UY09 585 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 MAMDC2Q7Z304 686 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 BPHLQ86WA6 291 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF761Q86XN6 746 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 IL22RA1Q8N6P7 574 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 OR5K1Q8NHB7 308 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 FBXO30Q8TB52 745 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms