RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	EXO1	Q9UQ84	846 aa	Known RBP	13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	WIPF3	A6NGB9	483 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	SLCO1B7	G3V0H7	640 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	PDPK1	O15530	556 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ITM2A	O43736	263 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	PPM1B	O75688	479 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	JUN	P05412	331 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	CCL3	P10147	92 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	PRPS1L1	P21108	318 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	BGN	P21810	368 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ABCD3	P28288	659 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	SOX18	P35713	384 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	HPCAL1	P37235	193 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	WDR4	P57081	412 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	KCNK10	P57789	538 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	GPR85	P60893	370 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	PPIA	P62937	165 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	MRPS22	P82650	360 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	MRPS35	P82673	323 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.13	□□□□□ -0.31	4e-8	■■■□□ 15.9
SDHD-209	ENST00000640554	SNTA1	Q13424	505 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	EXOSC7	Q15024	291 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	LTB4R	Q15722	352 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	FAM180B	Q6P0A1	224 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554		Q6ZPB1	254 aa	Predicted RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	SPPL2C	Q8IUH8	684 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	GOLGA6L1	Q8N7Z2	621 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ZNF781	Q8N8C0	355 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	FNDC5	Q8NAU1	212 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	CEP70	Q8NHQ1	597 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	KAT2A	Q92830	837 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ELP4	Q96EB1	424 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	MAGED4	Q96JG8	741 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	TSSK3	Q96PN8	268 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	NXF5	Q9H1B4	397 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	GLIPR2	Q9H4G4	154 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	DEPP	Q9NTK1	212 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ATAD3A	Q9NVI7	634 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	QPCTL	Q9NXS2	382 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ASIC5	Q9NY37	505 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	SH3BP4	Q9P0V3	963 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ATP6V1H	Q9UI12	483 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	ZNF835	Q9Y2P0	537 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	POLE	Q07864	2286 aa		13.13	□□□□□ -0.31
SDHD-209	ENST00000640554	FLNC	Q14315	2725 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ESPL1	Q14674	2120 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SLC19A2	O60779	497 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SEMA7A	O75326	666 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ERN1	O75460	977 aa	Known RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SKAP2	O75563	359 aa	Predicted RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	GLS	O94925	669 aa	Predicted RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SOX30	O94993	753 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ABCB1	P08183	1280 aa	Predicted RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	FRK	P42685	505 aa	Predicted RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	MANF	P55145	182 aa	Known RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	KCNJ2	P63252	427 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	BST1	Q10588	318 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	FOXO1	Q12778	655 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	MLC1	Q15049	377 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ZNHIT3	Q15649	155 aa	Predicted RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	RNFT1	Q5M7Z0	435 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	IL23R	Q5VWK5	629 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	TMEM198	Q66K66	360 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ARHGAP11A	Q6P4F7	1023 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	PACS2	Q86VP3	889 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SLC34A3	Q8N130	599 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	OR2L13	Q8N349	312 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	OR10G3	Q8NGC4	313 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SPPL2A	Q8TCT8	520 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	DIO2	Q92813	273 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	DTNBP1	Q96EV8	351 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	C3orf30	Q96M34	536 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	VSTM2L	Q96N03	204 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	SORT1	Q99523	831 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ITPA	Q9BY32	194 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ANGPTL4	Q9BY76	406 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	TTTY12	Q9BZ98	90 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ZDHHC11	Q9H8X9	412 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ZFP64	Q9NPA5	681 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	PLSCR2	Q9NRY7	297 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	DDX18	Q9NVP1	670 aa	Known RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	NOP53	Q9NZM5	478 aa	Known RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	B4GALT7	Q9UBV7	327 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	BAIAP2L1	Q9UHR4	511 aa		13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	CNOT11	Q9UKZ1	510 aa	Known RBP	13.12	□□□□□ -0.31
SDHD-209	ENST00000640554	ATP6AP2	A0A1C7CYW4	349 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	OR6C70	A6NIJ9	312 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	KLF11	O14901	512 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	LRRTM2	O43300	516 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	AKAP10	O43572	662 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	HS6ST1	O60243	411 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	ATP6AP2	O75787	350 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	CT45A8	P0DMV1	189 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	CT45A9	P0DMV2	189 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	H2AFX	P16104	143 aa	Predicted RBP	13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	KRT20	P35900	424 aa		13.11	□□□□□ -0.31
SDHD-209	ENST00000640554	CA7	P43166	264 aa		13.11	□□□□□ -0.31

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