RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 NOTCH4Q99466 2003 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 CPSF4LA6NMK7 179 aaKnown RBP15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 PRRT4C9JH25 899 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 PLA2G10O15496 165 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 ADH1AP07327 375 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 PSKH1P11801 424 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 SSR2P43308 183 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 WNT4P56705 351 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 CDK10Q15131 360 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 FNDC3BQ53EP0 1204 aaKnown RBP15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 OR8D4Q8NGM9 314 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 OR2L2Q8NH16 312 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC7A6Q92536 515 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 DPH7Q9BTV6 452 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 LGR4Q9BXB1 951 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 NPAP1Q9NZP6 1156 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 NDOR1Q9UHB4 597 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 DVL2O14641 736 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 NDUFS4O43181 175 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 NDUFB5O43674 189 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 HPGDSO60760 199 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 PAPLNO95428 1278 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 DDOSTP39656 456 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 OCLNQ16625 522 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 NDUFAF5Q5TEU4 345 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 KIAA1161Q6NSJ0 714 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 CCDC116Q8IYX3 515 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 FAM26EQ8N5C1 309 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 FAM46AQ96IP4 442 aaKnown RBP15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 ART5Q96L15 291 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 SNX18Q96RF0 628 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 POLDIP3Q9BY77 421 aaKnown RBP15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 TESQ9UGI8 421 aaKnown RBP15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 MTCL1Q9Y4B5 1905 aaKnown RBP15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 C2orf92A0A1B0GVN3 265 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 HMX3A6NHT5 357 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 PCCBP05166 539 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 RB1P06400 928 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 CPEP16870 476 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 KELP23276 732 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC6A11P48066 632 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC9A3P48764 834 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 DHCR24Q15392 516 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.59■□□□□ 0.095e-16■■□□□ 11.5
HNRNPU-228ENST00000640306 ZNF791Q3KP31 576 aaPredicted RBP15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC30A6Q6NXT4 461 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 LCTLQ6UWM7 567 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 UBE3DQ7Z6J8 389 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 AMZ2Q86W34 360 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 NUDT13Q86X67 352 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 ARMC5Q96C12 935 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 WDFY2Q96P53 400 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 SAP130Q9H0E3 1048 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 OSGEPL1Q9H4B0 414 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 KLHL31Q9H511 634 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 DKK3Q9UBP4 350 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 TMA7Q9Y2S6 64 aaKnown RBP15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 VCANP13611 3396 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 HEATR5BQ9P2D3 2071 aa15.59■□□□□ 0.09
HNRNPU-228ENST00000640306 A0A087WUU8 490 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 POLR1CO15160 346 aaPredicted RBP15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 IL1AP01583 271 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 PPP2R1BP30154 601 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 ZNF77Q15935 545 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 PRICKLE2Q7Z3G6 844 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 ZNF438Q7Z4V0 828 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 NRSN1Q8IZ57 195 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 SETD7Q8WTS6 366 aaKnown RBP15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 DHRS1Q96LJ7 313 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 FRMD6Q96NE9 622 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 BBS4Q96RK4 519 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 GFM1Q96RP9 751 aaKnown RBP15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 FUZQ9BT04 418 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC9A8Q9Y2E8 581 aa15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 GPR55Q9Y2T6 319 aaPredicted RBP15.58■□□□□ 0.09
HNRNPU-228ENST00000640306 OR6C70A6NIJ9 312 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 SMLR1H3BR10 107 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 SLC30A4O14863 429 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 KIAA0355O15063 1070 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 PGRMC2O15173 223 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 HMGN2P05204 90 aaKnown RBP15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 CELP19835 753 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 RNF144AP50876 292 aaPredicted RBP15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 DUSP2Q05923 314 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 CNIH2Q6PI25 160 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 XKRXQ6PP77 449 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 FAM92BQ6ZTR7 304 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 GRASPQ7Z6J2 395 aaPredicted RBP15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 DCUN1D3Q8IWE4 304 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 TP53I13Q8NBR0 393 aaPredicted RBP15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 SMAD5Q99717 465 aaKnown RBP15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 RNF121Q9H920 327 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 IRAK3Q9Y616 596 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 LRRK1Q38SD2 2015 aa15.58■□□□□ 0.08
HNRNPU-228ENST00000640306 A0A1W2PRQ8 180 aa15.57■□□□□ 0.08
HNRNPU-228ENST00000640306 CPNE3O75131 537 aaKnown RBP15.57■□□□□ 0.08
HNRNPU-228ENST00000640306 AVPR1BP47901 424 aa15.57■□□□□ 0.08
HNRNPU-228ENST00000640306 MTNR1AP48039 350 aa15.57■□□□□ 0.08
HNRNPU-228ENST00000640306 CCR8P51685 355 aa15.57■□□□□ 0.08
HNRNPU-228ENST00000640306 CLCNKAP51800 687 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms