RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 NDUFAF5Q5TEU4 345 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MAMSTRQ6ZN01 415 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PDZD3Q86UT5 571 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 LAPTM4BQ86VI4 370 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TMC8Q8IU68 726 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 KRT78Q8N1N4 520 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 C19orf18Q8NEA5 215 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 BBS1Q8NFJ9 593 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 OR52P1PQ8NH57 321 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 CXorf40AQ8TE69 158 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 HERVK_113Q902F9 699 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TMEM80Q96HE8 168 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PITX2Q99697 317 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 DPH7Q9BTV6 452 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RSPO3Q9BXY4 272 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 CRNNQ9UBG3 495 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 CABIN1Q9Y6J0 2220 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TDRD6O60522 2096 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 LAMA1P25391 3075 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TRIM64BA6NI03 449 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PSMD9O00233 223 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PIP5K1CO60331 668 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ARAFP10398 606 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 NR2F6P10588 404 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 GNSP15586 552 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ALAS2P22557 587 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MMP11P24347 488 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 CERS1P27544 350 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TM4SF4P48230 202 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RORCP51449 518 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RBBP4Q09028 425 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 DHCR24Q15392 516 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 IDNKQ5T6J7 187 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 C16orf62Q7Z3J2 963 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 SLC9B2Q86UD5 537 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ZNF761Q86XN6 746 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MARCH9Q86YJ5 346 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 KLBQ86Z14 1044 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ZNF557Q8N988 423 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 CYB561A3Q8NBI2 242 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 OR56A3Q8NH54 315 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TEX47Q8TBZ9 253 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 SMPDL3AQ92484 453 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RAD51AP1Q96B01 352 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RNFT2Q96EX2 444 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 DCLRE1CQ96SD1 692 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 GABARAPL3Q9BY60 117 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 BHLHE41Q9C0J9 482 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 CDCP1Q9H5V8 836 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ADAP2Q9NPF8 381 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 DPP7Q9UHL4 492 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TCF20Q9UGU0 1960 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 FAM240BA0A1B0GVZ2 78 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 SAGE2PA6NJ88 616 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 AGAP14A8MT82 685 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 H3BQ06 376 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 NPC1O15118 1278 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 REM1O75628 298 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 IGHA2P01877 340 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 GKN3PP0CG01 181 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RHCEP18577 417 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 LAG3P18627 525 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MMP12P39900 470 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MC3RP41968 323 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 RGS8P57771 180 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 SRSF5Q13243 272 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ZNF181Q2M3W8 571 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 C2orf27AQ580R0 203 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 ZER1Q7Z7L7 766 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 GALNT13Q8IUC8 556 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 SLAIN1Q8ND83 568 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 OR9A2Q8NGT5 310 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 POF1BQ8WVV4 589 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 SUSD6Q92537 303 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PAWRQ96IZ0 340 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 AIF1LQ9BQI0 150 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 C11orf54Q9H0W9 315 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MRPL39Q9NYK5 338 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 MRPL15Q9P015 296 aaKnown RBP7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PTGFRNQ9P2B2 879 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 TBC1D24Q9ULP9 559 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 PCDHGB1Q9Y5G3 927 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 HSPE1-MOB4S4R3N1 261 aa7.28□□□□□ -1.24
NECAP1-221ENST00000639955 IGLV3-16A0A075B6K0 115 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 MEIOCA2RUB1 952 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 C12orf71A8MTZ7 269 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 HEPACAM2A8MVW5 462 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 OSMP13725 252 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 CBLP22681 906 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 CPN2P22792 545 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 AHRP35869 848 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 P2RX3P56373 397 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 IFITM2Q01629 132 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 AGAP6Q5VW22 663 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 KHDRBS2Q5VWX1 349 aaKnown RBP7.27□□□□□ -1.25
NECAP1-221ENST00000639955 FAM71E1Q6IPT2 247 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 ARL9Q6T311 187 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 UNC5DQ6UXZ4 953 aa7.27□□□□□ -1.25
NECAP1-221ENST00000639955 ZNF367Q7RTV3 350 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms