RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 LIPJQ5W064 366 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TTC19Q6DKK2 380 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TFAP2EQ6VUC0 442 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TIFABQ6ZNK6 161 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 IQCHQ86VS3 1027 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 HEATR4Q86WZ0 1026 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TTC39CQ8N584 583 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 KIR3DL3Q8N743 410 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 C14orf178Q8N769 122 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ANKRD42Q8N9B4 389 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 COLGALT1Q8NBJ5 622 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SETD7Q8WTS6 366 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 DNASE1L2Q92874 299 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SEH1LQ96EE3 360 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 KCNA7Q96RP8 456 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SEPHS2Q99611 448 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 KRT23Q9C075 422 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 C20orf85Q9H1P6 137 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 DPEP3Q9H4B8 488 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ISG20L2Q9H9L3 353 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SPHK2Q9NRA0 654 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PHPT1Q9NRX4 125 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PLAC8Q9NZF1 115 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SVILO95425 2214 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SHANK1Q9Y566 2161 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 LRP6O75581 1613 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 A0A1B0GVX0 72 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CHEK1O14757 476 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 AIREO43918 545 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 IL7RP16871 459 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PTPN4P29074 926 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GNL1P36915 607 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 FOXA1P55317 472 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 STARD6P59095 220 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 RUNX2Q13950 521 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF235Q14590 738 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TMEM132DQ14C87 1099 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MICAQ29983 383 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC96Q2M329 555 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF699Q32M78 642 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CELF3Q5SZQ8 465 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 IRGCQ6NXR0 463 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SLC24A5Q71RS6 500 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CAMKMTQ7Z624 323 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 OR9A4Q8NGU2 314 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SGMS2Q8NHU3 365 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 FGF14Q92915 247 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 HDAC11Q96DB2 347 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 STARD4Q96DR4 205 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 WFIKKN1Q96NZ8 548 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ACCSQ96QU6 501 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DEFB127Q9H1M4 99 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GANQ9H2C0 597 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TMEM245Q9H330 911 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GORASP2Q9H8Y8 452 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MRGBPQ9NV56 204 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PHF11Q9UIL8 331 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF223Q9UK11 482 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 KLK12Q9UKR0 248 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SNX7Q9UNH6 387 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 FAF1Q9UNN5 650 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 RNF6Q9Y252 685 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 A0A1W2PQ09 198 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 OOEPA6NGQ2 149 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF705GA8MUZ8 300 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 FAM189A1O60320 539 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SELENOFO60613 162 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 EPOP01588 193 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CAPN1P07384 714 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 VPREB1P12018 145 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PFKFB1P16118 471 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MAGP20916 626 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 LMAN1P49257 510 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CDH13P55290 713 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 RPS18P62269 152 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 VEZF1Q14119 521 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GIT2Q14161 759 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 FAM83EQ2M2I3 478 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CFAP161Q6P656 301 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CHST3Q7LGC8 479 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 LRRC70Q7Z2Q7 622 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF589Q86UQ0 364 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 NOA1Q8NC60 698 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF397Q8NF99 534 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 OR1K1Q8NGR3 316 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MRPL38Q96DV4 380 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ITCHQ96J02 903 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SERAC1Q96JX3 654 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GCNAQ96QF7 691 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 INPP5KQ9BT40 448 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TXLNGYQ9BZA5 131 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 STRADBQ9C0K7 418 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 UPF2Q9HAU5 1272 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF586Q9NXT0 402 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MYO15BQ96JP2 1530 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 APC2O95996 2303 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PKD1L1Q8TDX9 2849 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SDK2Q58EX2 2172 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms