RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	AAGAB	Q6PD74	315 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	IFNE	Q86WN2	208 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	OR52R1	Q8NGF1	315 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	RDH11	Q8TC12	318 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	NSUN5	Q96P11	429 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	ALPK1	Q96QP1	1244 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	TM9SF2	Q99805	663 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	RBM24	Q9BX46	236 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	MRPL46	Q9H2W6	279 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	UBQLN3	Q9H347	655 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	NINJ2	Q9NZG7	142 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	EHD3	Q9NZN3	535 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	DKKL1	Q9UK85	242 aa		13.41	□□□□□ -0.26
TARDBP-231	ENST00000639599	UQCRHL	A0A096LP55	91 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MBD3L3	A6NE82	208 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	POC1B-GALNT4	F8VUJ3	575 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	SNPH	O15079	494 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	REM1	O75628	298 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	CBR3	O75828	277 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	GOSR1	O95249	250 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	IL18BP	O95998	194 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	KRT6A	P02538	564 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	KRT6B	P04259	564 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	ATP1B1	P05026	303 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	COL6A2	P12110	1019 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	CNTF	P26441	200 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	KRT6C	P48668	564 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MAP4K2	Q12851	820 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	EXOSC7	Q15024	291 aa	Known RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	PRICKLE4	Q2TBC4	344 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	LGSN	Q5TDP6	509 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	FAM111B	Q6SJ93	734 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	PAMR1	Q6UXH9	720 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	P4HA3	Q7Z4N8	544 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	LUZP2	Q86TE4	346 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	PLD6	Q8N2A8	252 aa	Known RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	ZPLD1	Q8TCW7	415 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	WDYHV1	Q96HA8	205 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	ZFP3	Q96NJ6	502 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	GPR78	Q96P69	363 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	PAFAH2	Q99487	392 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MRPL57	Q9BQC6	102 aa	Known RBP	13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	TMUB1	Q9BVT8	246 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	SFXN3	Q9BWM7	321 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	CXXC4	Q9H2H0	198 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	LIME1	Q9H400	295 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	BRF2	Q9HAW0	419 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	GALNT9	Q9HCQ5	603 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	SERHL	Q9NQF3	203 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	MAT2B	Q9NZL9	334 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	UTS2R	Q9UKP6	389 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	PLLP	Q9Y342	182 aa		13.4	□□□□□ -0.26
TARDBP-231	ENST00000639599	PDZD2	O15018	2839 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	GNG14	A0A1W2PPG7	69 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	HMX2	A2RU54	273 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	CCDC151	A5D8V7	595 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	C2orf72	A6NCS6	295 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	FRG2C	A6NGY1	282 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	ABCB7	O75027	752 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	ICOSLG	O75144	302 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	PDYN	P01213	254 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	HMOX2	P30519	316 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	NAGLU	P54802	743 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	TRA2B	P62995	288 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	EEF1A1	P68104	462 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	PSPH	P78330	225 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	MRPS22	P82650	360 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	DAZAP2	Q15038	168 aa	Predicted RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	EEF1A1P5	Q5VTE0	462 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	GRAMD2A	Q8IUY3	354 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	C1orf52	Q8N6N3	182 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	LINC01560	Q8TB33	94 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	SLC44A1	Q8WWI5	657 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	IFT81	Q8WYA0	676 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	SFXN2	Q96NB2	322 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	NODAL	Q96S42	347 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	FMO2	Q99518	471 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	TAS2R10	Q9NYW0	307 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	VPS29	Q9UBQ0	182 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	TRPS1	Q9UHF7	1281 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	EIF3L	Q9Y262	564 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	DTX4	Q9Y2E6	619 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	INTS1	Q8N201	2190 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	C2CD3	Q4AC94	2353 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZNF407	Q9C0G0	2248 aa		13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	PHF3	Q92576	2039 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-231	ENST00000639599	CLCA1	A8K7I4	914 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	KDM4E	B2RXH2	506 aa	Predicted RBP	13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	TRIM49D1	C9J1S8	452 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	RPS17	P08708	135 aa	Known RBP	13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	DRD2	P14416	443 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	PCSK2	P16519	638 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	TSPAN8	P19075	237 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	CPOX	P36551	454 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	PPIC	P45877	212 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms