RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ATG12O94817 140 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 OR2A4O95047 310 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 TFP02787 698 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 SYPP08247 313 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 TXNP10599 105 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 PRF1P14222 555 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 NPR2P20594 1047 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 HOXA11P31270 313 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 ETV5P41161 510 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 SMSP52788 366 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 DCDP81605 110 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 DEFA5Q01523 94 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 DYRK1AQ13627 763 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 IHHQ14623 411 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 HEPACAMQ14CZ8 416 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 UGT8Q16880 541 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 SLC30A6Q6NXT4 461 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 OR8J2Q8NGG1 315 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 RAD51AP1Q96B01 352 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 TCEAL4Q96EI5 215 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 OR2A7Q96R45 310 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 NSUN3Q9H649 340 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 RPS6KB2Q9UBS0 482 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 GJD2Q9UKL4 321 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 FNDC3AQ9Y2H6 1198 aaKnown RBP11.37□□□□□ -0.59
CAPN3-221ENST00000638141 A0A1B0GUH1 482 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 OR2M5A3KFT3 312 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 GABRR3A8MPY1 467 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 HEPACAM2A8MVW5 462 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SUSD5O60279 629 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 NBNO60934 754 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 FBP1P09467 338 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SDC1P18827 310 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 RGS4P49798 205 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 WNT3P56703 355 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 MAXP61244 160 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SYTL3Q4VX76 610 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 HBMQ6B0K9 141 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ZC3H14Q6PJT7 736 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 LYPD4Q6UWN0 246 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 CASP12Q6UXS9 341 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 CEACAM20Q6UY09 585 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TSPAN33Q86UF1 283 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 METTL23Q86XA0 190 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 STX12Q86Y82 276 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SKA3Q8IX90 412 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 NEIL3Q8TAT5 605 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 GEMIN6Q8WXD5 167 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 HMCESQ96FZ2 354 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 GAL3ST1Q99999 423 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TCF25Q9BQ70 676 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 DPH2Q9BQC3 489 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ARHGAP9Q9BRR9 750 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 POLDIP3Q9BY77 421 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SPRTNQ9H040 489 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ANKRD19PQ9H560 264 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SEBOXQ9HB31 216 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 POLE3Q9NRF9 147 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 MED11Q9P086 117 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 KLF15Q9UIH9 416 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 KCND3Q9UK17 655 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 EXOSC1Q9Y3B2 195 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TDRD15B5MCY1 1934 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 SMIM30A4D0T7 59 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 AGAP14A8MT82 685 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 NIPSNAP2O75323 286 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TOXO94900 526 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 GIFP27352 417 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 GAS1P54826 345 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ERVK-25P63136 954 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 RELQ04864 619 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 VASNQ6EMK4 673 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 HAGHLQ6PII5 290 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 USP53Q70EK8 1073 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF485Q8NCK3 441 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 OR52J3Q8NH60 311 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 PHOSPHO2Q8TCD6 241 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 KAT2AQ92830 837 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 HHIPL1Q96JK4 782 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 ACPTQ9BZG2 426 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 C11orf49Q9H6J7 331 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 NMNAT1Q9HAN9 279 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TPT1P8Q9HAU6 139 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 RDH14Q9HBH5 336 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TLR8Q9NR97 1041 aaKnown RBP11.36□□□□□ -0.59
CAPN3-221ENST00000638141 DOCK4Q8N1I0 1966 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 PATJQ8NI35 1801 aa11.36□□□□□ -0.59
CAPN3-221ENST00000638141 TEX46H3BTG2 121 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 TAPBPO15533 448 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms