RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 BCAP29Q9UHQ4 241 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 FOXD3Q9UJU5 478 aaPredicted RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 ZNF225Q9UK10 706 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 CAMK2AQ9UQM7 478 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 CD8B2A6NJW9 211 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 A8MT66 165 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 TRIM49D1C9J1S8 452 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 ACOX3O15254 700 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 CBX7O95931 251 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 TSPAN8P19075 237 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 PTGDSP41222 190 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 NAGLUP54802 743 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 TRA2BP62995 288 aaKnown RBP16.85■□□□□ 0.29
CLN6-220ENST00000637450 DUSP2Q05923 314 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 TOMM20Q15388 145 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 NNATQ16517 81 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 DCST1Q5T197 706 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 SLC30A6Q6NXT4 461 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 MMGT1Q8N4V1 131 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 FAM83FQ8NEG4 500 aaPredicted RBP16.85■□□□□ 0.29
CLN6-220ENST00000637450 ADCY4Q8NFM4 1077 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 FAM222BQ8WU58 562 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 OMA1Q96E52 524 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 ZNF681Q96N22 645 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 NODALQ96S42 347 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 FOXC2Q99958 501 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 CLEC4MQ9H2X3 399 aaPredicted RBP16.85■□□□□ 0.29
CLN6-220ENST00000637450 EPB41L4BQ9H329 900 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 LIME1Q9H400 295 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 CALHM2Q9HA72 323 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 CCM2LQ9NUG4 571 aaPredicted RBP16.85■□□□□ 0.29
CLN6-220ENST00000637450 TRPS1Q9UHF7 1281 aa16.85■□□□□ 0.29
CLN6-220ENST00000637450 PRRC2AP48634 2157 aaKnown RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 VPS13CQ709C8 3753 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 MBD3L4A6NDZ8 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 MBD3L3A6NE82 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 MBD3L5A6NJ08 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 POC1B-GALNT4F8VUJ3 575 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 ICOSLGO75144 302 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 DRD5P21918 477 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 HSD17B3P37058 310 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 EMDP50402 254 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 DCAF7P61962 342 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 SNTA1Q13424 505 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 WHAMMP3Q1A5X7 153 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 FLYWCH1Q4VC44 716 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 TRMT12Q53H54 448 aaKnown RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 FAM219BQ5XKK7 198 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 ANGPTL8Q6UXH0 198 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 C1orf52Q8N6N3 182 aaKnown RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 OR52R1Q8NGF1 315 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 MBD3L2Q8NHZ7 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 IFT81Q8WYA0 676 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 KLHL29Q96CT2 875 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 CNRIP1Q96F85 164 aaPredicted RBP16.84■□□□□ 0.29
CLN6-220ENST00000637450 TRIB1Q96RU8 372 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 FMO2Q99518 471 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 FAIM2Q9BWQ8 316 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 VPS29Q9UBQ0 182 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 ST6GALNAC2Q9UJ37 374 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 PLLPQ9Y342 182 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 FREM3P0C091 2139 aa16.84■□□□□ 0.29
CLN6-220ENST00000637450 A6NNC1 897 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 SNPHO15079 494 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 TO15178 435 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 URI1O94763 535 aaPredicted RBP16.83■□□□□ 0.28
CLN6-220ENST00000637450 OR4F21O95013 312 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 ACTL6AO96019 429 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 RHOXF2BP0C7M4 288 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 CTSSP25774 331 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 ECHS1P30084 290 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 PPICP45877 212 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 CLCQ05315 142 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 PLCXD2Q0VAA5 305 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 DAZAP2Q15038 168 aaPredicted RBP16.83■□□□□ 0.28
CLN6-220ENST00000637450 FAM180BQ6P0A1 224 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 YRDCQ86U90 279 aaKnown RBP16.83■□□□□ 0.28
CLN6-220ENST00000637450 UHMK1Q8TAS1 419 aaKnown RBP16.83■□□□□ 0.28
CLN6-220ENST00000637450 ZPLD1Q8TCW7 415 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 HBEGFQ99075 208 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 TMUB1Q9BVT8 246 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 OSBPL11Q9BXB4 747 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 GALNT9Q9HCQ5 603 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 PRODH2Q9UF12 536 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 EXO1Q9UQ84 846 aaKnown RBP16.83■□□□□ 0.28
CLN6-220ENST00000637450 ZNF780BQ9Y6R6 833 aa16.83■□□□□ 0.28
CLN6-220ENST00000637450 ARHGAP21Q5T5U3 1957 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 C2orf72A6NCS6 295 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 MANBAO00462 879 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 UGT2B11O75310 529 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 CBR3O75828 277 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 SNRPAP09012 282 aaKnown RBP16.82■□□□□ 0.28
CLN6-220ENST00000637450 HSD3B1P14060 373 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 CPN1P15169 458 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 PCSK2P16519 638 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 HSD3B2P26439 372 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 ALDH9A1P49189 494 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 AGFG1P52594 562 aaKnown RBP16.82■□□□□ 0.28
CLN6-220ENST00000637450 LTB4RQ15722 352 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms