RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 HS6ST2Q96MM7 605 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 LINC00597Q9H2U6 94 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 NLE1Q9NVX2 485 aaPredicted RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 OR52A4PA6NMU1 304 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 AGPAT2O15120 278 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 EIF5AP63241 154 aaKnown RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 CSNK2A1P68400 391 aaPredicted RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF718Q3SXZ3 478 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 C22orf42Q6IC83 251 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 FIGLAQ6QHK4 219 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 CSNK2A3Q8NEV1 391 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 GLYATL1Q969I3 302 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 RRP8O43159 456 aaKnown RBP17■□□□□ 0.31
CACNA1A-227ENST00000636549 P2RY2P41231 377 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 PRAMEF20Q5VT98 475 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 HORMAD2Q8N7B1 307 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 LRCH3Q96II8 777 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 TMEM246Q9BRR3 403 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 C17orf105B2RV13 164 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 FLRT2O43155 660 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 PRKXP51817 358 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 CTXN1P60606 82 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 ZP2Q05996 745 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 PRICKLE2Q7Z3G6 844 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 TP53TG5Q9Y2B4 290 aa17■□□□□ 0.31
CACNA1A-227ENST00000636549 LCHNA4D1U4 455 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 ANKRD30BLA7E2S9 258 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 IFNA17P01571 189 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 RPS2P15880 293 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 CEBPBP17676 345 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 CERS1P27544 350 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 STT3BQ8TCJ2 826 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 MAL2Q969L2 176 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 COQ3Q9NZJ6 369 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF30P17039 623 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 ALKBH6Q3KRA9 238 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 LIN52Q52LA3 116 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 PSD4Q8NDX1 1056 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 SLC2A12Q8TD20 617 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 SLAMF9Q96A28 289 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 KATNBL1Q9H079 304 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 A0A0U1RQF3 1178 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 GABRDO14764 452 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 FRKP42685 505 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 MYBPHQ13203 477 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 ARHGAP12Q8IWW6 846 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 OR1S1Q8NH92 325 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 CGREF1Q99674 301 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 SULT4A1Q9BR01 284 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 USP36Q9P275 1121 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 SLCO3A1Q9UIG8 710 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 CNOT11Q9UKZ1 510 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 F5H0A9 414 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 SYT7O43581 403 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 NTSR1P30989 418 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 CES4AQ5XG92 561 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 LPLP06858 475 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 MGST1P10620 155 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 GSTM3P21266 225 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 UQCRC2P22695 453 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 RPS3P23396 243 aaKnown RBP eCLIP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 MAT1AQ00266 395 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 HERC3Q15034 1050 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 LMNTD1Q8N9Z9 388 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 LRFN5Q96NI6 719 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 DOHHQ9BU89 302 aa16.99■□□□□ 0.31
CACNA1A-227ENST00000636549 LMTK2Q8IWU2 1503 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 H7C2Y5 167 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 PMM2O15305 246 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 GMPRP36959 345 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 CAMLGP49069 296 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 CAV2P51636 162 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 CLCN2P51788 898 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 HEPHL1Q6MZM0 1159 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF566Q969W8 418 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 REEP4Q9H6H4 257 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 GPATCH2Q9NW75 528 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 BTNL10A8MVZ5 291 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 SERPINA2P20848 420 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF81P51508 661 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 TRAM2Q15035 370 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF517Q6ZMY9 492 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 TMPRSS7Q7RTY8 843 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 FITM2Q8N6M3 262 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 GLB1L3Q8NCI6 653 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 TBCCD1Q9NVR7 557 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 ROBO1Q9Y6N7 1651 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 A0A0A6YYC8 382 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 I3L1I5 382 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 AQP7O14520 342 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 SLC10A1Q14973 349 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 OR51Q1Q8NH59 317 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 ZFYVE21Q9BQ24 234 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 HDHD5Q9BXW7 423 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 RDH14Q9HBH5 336 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 IMPA2O14732 288 aa16.98■□□□□ 0.31
CACNA1A-227ENST00000636549 GPR37L1O60883 481 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms