RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SV2AQ7L0J3 742 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 MTURNQ8N3F0 131 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR2T33Q8NG76 320 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 OR8K5Q8NH50 307 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SLC13A3Q8WWT9 602 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM80Q96HE8 168 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 LRRC3Q9BY71 257 aa5.77□□□□□ -1.49
SCN1A-212ENST00000636194 SPATA6Q9NWH7 488 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-212ENST00000636194 A0A1B0GVT2 93 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GABRR3A8MPY1 467 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ADAM10O14672 748 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 INSIG1O15503 277 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LAMTOR5O43504 91 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 AOC2O75106 756 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CDK1P06493 297 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PRKACGP22612 351 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GKP32189 559 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ETV6P41212 452 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PREPP48147 710 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PGM5Q15124 567 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 DEFB115Q30KQ5 88 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 FIGNQ5HY92 759 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PDE12Q6L8Q7 609 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SHC4Q6S5L8 630 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SLC26A9Q7LBE3 791 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TRABD2AQ86V40 505 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 GTPBP8Q8N3Z3 284 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LRRC52Q8N7C0 313 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 C3orf58Q8NDZ4 430 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MYLIPQ8WY64 445 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 OR11A1Q9GZK7 315 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ABCG8Q9H221 673 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ZDHHC11Q9H8X9 412 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 EMC7Q9NPA0 242 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PCNX1Q96RV3 2341 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MAP3K4Q9Y6R4 1608 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CDC123O75794 336 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 OR2J3O76001 311 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 RRADP55042 308 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MTF1Q14872 753 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ODF4Q2M2E3 257 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 RHBDF2Q6PJF5 856 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 FAM198BQ6UWH4 519 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF852Q6ZMS4 543 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CDH26Q8IXH8 852 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 RNF175Q8N4F7 328 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LRCH3Q96II8 777 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LCORQ96JN0 433 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SLC2A13Q96QE2 648 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MTERF1Q99551 399 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PTPN18Q99952 460 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 HES7Q9BYE0 225 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 HOXD1Q9GZZ0 328 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 OR10A5Q9H207 317 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 OR10A2Q9H208 303 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM134Q9H6X4 195 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 NT5DC2Q9H857 520 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 VRTNQ9H8Y1 702 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SLCO1B3Q9NPD5 702 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 PLEKHJ1Q9NW61 149 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 MYO5AQ9Y4I1 1855 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 KDM6BO15054 1643 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ZDHHC11BP0C7U3 371 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 EPHA1P21709 976 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CERS1P27544 350 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 HOXA11P31270 313 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TRAM2Q15035 370 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CNPY1Q3B7I2 92 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 B3GNTL1Q67FW5 361 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TLDC1Q6P9B6 456 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 BTNL3Q6UXE8 466 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ST8SIA2Q92186 375 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 RPL3LQ92901 407 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 IRF7Q92985 503 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 INTS12Q96CB8 462 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LRR1Q96L50 414 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 EGLN1Q9GZT9 426 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 NLE1Q9NVX2 485 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 C4orf47A7E2U8 309 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ERI3O43414 337 aaKnown RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ADH5P11766 374 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CD36P16671 472 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SERPINA2P20848 420 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 KCNC4Q03721 635 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SRYQ05066 204 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 LY6KQ17RY6 165 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 SEZ6Q53EL9 994 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 DRICH1Q6PGQ1 229 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 KIAA0319LQ8IZA0 1049 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CPXM2Q8N436 756 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 FAM83FQ8NEG4 500 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-212ENST00000636194 APH1BQ8WW43 257 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ITPKCQ96DU7 683 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 REEP6Q96HR9 211 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 IL4I1Q96RQ9 567 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 S1PR3Q99500 378 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 ARPC5LQ9BPX5 153 aa5.76□□□□□ -1.49
SCN1A-212ENST00000636194 CWH43Q9H720 699 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms