RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 FAM3CQ92520 227 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 A6NLC8 198 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 G3V2L1 256 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 P04436 131 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 PET100P0DJ07 73 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 HNRNPA2B1P22626 353 aaKnown RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 GJA8P48165 433 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 PLEKHN1Q494U1 663 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF789Q5FWF6 425 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 DCDC5Q6ZRR9 648 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 TRIM73Q86UV7 250 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 MEN1O00255 615 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 HSD17B1P14061 328 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 FAM189BP81408 668 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 GALNT1Q10472 559 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 MALLQ13021 153 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 BTBD16Q32M84 506 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 LEG1Q6P5S2 330 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 NRMQ8IXM6 262 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 GPR137CQ8N3F9 429 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 ASB12Q8WXK4 309 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 RHBDF1Q96CC6 855 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 SLC25A44Q96H78 314 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-209ENST00000627620 STUB1Q9UNE7 303 aa12.18□□□□□ -0.46
SCN8A-209ENST00000627620 TCHHQ07283 1943 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 A0A0U1RQS6 177 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 M0R233 179 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PCDH17O14917 1159 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ARHGEF15O94989 841 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 CA3P07451 260 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 OTX2P32243 289 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF81P51508 661 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ECH1Q13011 328 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 GRIN2CQ14957 1233 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 TBRG1Q3YBR2 411 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 MAMDC2Q7Z304 686 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 OR4K5Q8NGD3 323 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 SLC41A3Q96GZ6 507 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 LPAR4Q99677 370 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 SMOXQ9NWM0 555 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 GPR83Q9NYM4 423 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ADAP00813 363 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 HRGP04196 525 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 GSTM2P28161 218 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PTGS2P35354 604 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 HLCSP50747 726 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 AIMP2Q13155 320 aaKnown RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 CTC1Q2NKJ3 1217 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 RAB11FIP2Q7L804 512 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 HOXB13Q92826 284 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 KCNK13Q9HB14 408 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PRAMEF2O60811 474 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ATE1O95260 518 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 MAS1P04201 325 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PROS1P07225 676 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 AMY2BP19961 511 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 POU3F4P49335 361 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 FNTBP49356 437 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 FOXK1P85037 733 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 APOFQ13790 326 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 LETMD1Q6P1Q0 360 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PLBD1Q6P4A8 553 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 RPLP0P6Q8NHW5 317 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PTERQ96BW5 349 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 INPP5KQ9BT40 448 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 HDHD5Q9BXW7 423 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 HOXD1Q9GZZ0 328 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 HSPE1-MOB4S4R3N1 261 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF142P52746 1687 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 TRAPPC13A5PLN9 417 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 RGNQ15493 299 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 LSM14AQ8ND56 463 aaKnown RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 OR2T4Q8NH00 348 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
SCN8A-209ENST00000627620 NETO1Q8TDF5 533 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 IL17CQ9P0M4 197 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 KCNN3Q9UGI6 736 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 SCML1Q9UN30 329 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 SPEF1Q9Y4P9 236 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 LRRC37A3O60309 1634 aa12.17□□□□□ -0.46
SCN8A-209ENST00000627620 H7C417 338 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-209ENST00000627620 SNAPC5O75971 98 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 MAP2K3P46734 347 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 RGS19P49795 217 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 BAIAP2L2Q6UXY1 529 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 NAGSQ8N159 534 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-209ENST00000627620 SLC5A8Q8N695 610 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 MYRFLQ96LU7 910 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 SERINC2Q96SA4 455 aa12.16□□□□□ -0.46
SCN8A-209ENST00000627620 MYNNQ9NPC7 610 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms