RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 C18orf21Q32NC0 220 aaPredicted RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 Q6ZSR6 202 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ELP5Q8TE02 316 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ZFPM2Q8WW38 1151 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 FCAMRQ8WWV6 532 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 HSPA12BQ96MM6 686 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 LMF2Q9BU23 707 aaKnown RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 PRSS21Q9Y6M0 314 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ECM29Q5VYK3 1845 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 KAT6AQ92794 2004 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CER1O95813 267 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 IGLV3-25P01717 112 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 STOMP27105 288 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CDH15P55291 814 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 RPS15P62841 145 aaKnown RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ACVR1Q04771 509 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CBFBQ13951 182 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 RNASE12Q5GAN4 147 aaKnown RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 GTF2IRD2BQ6EKJ0 949 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 C5orf46Q6UWT4 87 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 GTF2IRD2Q86UP8 949 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 OR8J2Q8NGG1 315 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 PIGKQ92643 395 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ELSPBP1Q96BH3 223 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CNOT2Q9NZN8 540 aaKnown RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 SRPX2O60687 465 aaPredicted RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 KDM4BO94953 1096 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 DIRAS1O95057 198 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 STATHP02808 62 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 YES1P07947 543 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 H2BFMP0C1H6 154 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 GRK5P34947 590 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 GCGRP47871 477 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 SLC6A9P48067 706 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 NUDT6P53370 316 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 PLP2Q04941 152 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ARL6IP1Q15041 203 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 FAM78AQ5JUQ0 283 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ZNF517Q6ZMY9 492 aaPredicted RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ASB18Q6ZVZ8 466 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 TIGD4Q8IY51 512 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 PIANPQ8IYJ0 282 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 OR2L3Q8NG85 312 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 MROQ9BYG7 248 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 LDAHQ9H6V9 325 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 HCFC1R1Q9NWW0 138 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 RHCGQ9UBD6 479 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CLCA1A8K7I4 914 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 SOX1O00570 391 aaPredicted RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 GKN3PP0CG01 181 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ZNF888P0CJ79 500 aaPredicted RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 DAP3P51398 398 aaKnown RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 HK3P52790 923 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 NTHL1P78549 312 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 SHC2P98077 582 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CBLL1Q75N03 491 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 TRIM46Q7Z4K8 759 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CLECL1Q8IZS7 167 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 PGBD5Q8N414 524 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 HORMAD2Q8N7B1 307 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 CEP76Q8TAP6 659 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 LMAN1LQ9HAT1 526 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 NUFIP1Q9UHK0 495 aaKnown RBP8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 GLS2Q9UI32 602 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 DHDHQ9UQ10 334 aa8.42□□□□□ -1.06
AP000542.3-201ENST00000623391 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ZDHHC11BP0C7U3 371 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 PRSS56P0CW18 603 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ETFAP13804 333 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 HLA-FP30511 346 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 GLP1RP43220 463 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 MAD2L1BPQ15013 274 aaPredicted RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 SLC18B1Q6NT16 456 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 CGB2Q6NT52 195 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 PAQR7Q86WK9 346 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 TMEM130Q8N3G9 435 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 OR2A12Q8NGT7 310 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 NAT6Q93015 286 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 NEIL2Q969S2 332 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ZFP3Q96NJ6 502 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ACSL6Q9UKU0 697 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 GMEB1Q9Y692 573 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 FTCDNL1E5RQL4 147 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 IFNA7P01567 189 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 PVALBP20472 110 aaPredicted RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 RIDAP52758 137 aaKnown RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 EIF5AL1Q6IS14 154 aaKnown RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 TMEM173Q86WV6 379 aaPredicted RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ARMC5Q96C12 935 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ZNF300Q96RE9 604 aaPredicted RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 B3GNT4Q9C0J1 378 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 SEC61A2Q9H9S3 476 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 ERVK-18Q9QC07 812 aa8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 MYH9P35579 1960 aaKnown RBP8.41□□□□□ -1.06
AP000542.3-201ENST00000623391 UBR3Q6ZT12 1888 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms