RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZSWIM7Q19AV6 140 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 CNPY1Q3B7I2 92 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 YOD1Q5VVQ6 348 aaPredicted RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 TCTN3Q6NUS6 607 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 RBM44Q6ZP01 1051 aaKnown RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 PEX5LQ8IYB4 626 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 ARHGEF39Q8N4T4 335 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 DEFB119Q8N690 84 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 GPR32P1Q8NGA4 272 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 COL26A1Q96A83 441 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 PRRC1Q96M27 445 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 YIPF3Q9GZM5 350 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 KLHL25Q9H0H3 589 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 RBM38Q9H0Z9 239 aaKnown RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 NMNAT1Q9HAN9 279 aaPredicted RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 RSL24D1Q9UHA3 163 aaKnown RBP15.33■□□□□ 0.04
LDB3-208ENST00000623007 PCDHGB1Q9Y5G3 927 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 CEP192Q8TEP8 1941 aa15.33■□□□□ 0.04
LDB3-208ENST00000623007 FITM1A5D6W6 292 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 SLC1A7O00341 560 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 YKT6O15498 198 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 DUX1O43812 170 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 KIF1CO43896 1103 aaKnown RBP15.32■□□□□ 0.04
LDB3-208ENST00000623007 CHRM4P08173 479 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MSL3P1P0C860 447 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 GLB1P16278 677 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MAOBP27338 520 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 GALNSP34059 522 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 RPP38P78345 283 aaKnown RBP15.32■□□□□ 0.04
LDB3-208ENST00000623007 SHC2P98077 582 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MVKQ03426 396 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 RAPSNQ13702 412 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 NR1D2Q14995 579 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 ZNF311Q5JNZ3 666 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MLIPQ5VWP3 458 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MED25Q71SY5 747 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 P3H2Q8IVL5 708 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 SLC5A8Q8N695 610 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 OR7G2Q8NG99 324 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 CSF3RQ99062 836 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MAP3K3Q99759 626 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 DUSP23Q9BVJ7 150 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 FNDC11Q9BVV2 318 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 TMEM9Q9P0T7 183 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 SLCO1B1Q9Y6L6 691 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 PRAMEF25A6NGN4 478 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 CTNSO60931 367 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 NOL3O60936 208 aaKnown RBP15.32■□□□□ 0.04
LDB3-208ENST00000623007 PNLIPP16233 465 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 NT5EP21589 574 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 CBLP22681 906 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 ELK4P28324 431 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 GSTT1P30711 240 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 GGT2P36268 569 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 CLK3P49761 638 aaKnown RBP15.32■□□□□ 0.04
LDB3-208ENST00000623007 CDC42P60953 191 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 DUSP2Q05923 314 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MAP4K2Q12851 820 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 SERTAD2Q14140 314 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 AP1ARQ63HQ0 302 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 B3GNT6Q6ZMB0 384 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 ZNF761Q86XN6 746 aaPredicted RBP15.32■□□□□ 0.04
LDB3-208ENST00000623007 SVOPQ8N4V2 548 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 DEFB123Q8N688 67 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 KAT2AQ92830 837 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 BARD1Q99728 777 aaKnown RBP15.32■□□□□ 0.04
LDB3-208ENST00000623007 DGCR6LQ9BY27 220 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 SLC38A1Q9H2H9 487 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 FAM60AQ9NP50 221 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 SOHLH2Q9NX45 425 aa15.32■□□□□ 0.04
LDB3-208ENST00000623007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 PRAMEF27A3QJZ7 478 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 CHST10O43529 356 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 AHCYL1O43865 530 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 OR10H2O60403 315 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 TNFRSF1BP20333 461 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 GSTM3P21266 225 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 PPM1FP49593 454 aaPredicted RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 CSNK1EP49674 416 aaKnown RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 UGT2B15P54855 530 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 HSD17B7P56937 341 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 MAD2L1BPQ15013 274 aaPredicted RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 ZNHIT3Q15649 155 aaPredicted RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 PRICKLE4Q2TBC4 344 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 ZNF750Q32MQ0 723 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 EXOSC6Q5RKV6 272 aaKnown RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 FHL5Q5TD97 284 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 KCTD8Q6ZWB6 473 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 CTHRC1Q96CG8 243 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 NODALQ96S42 347 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 KRCC1Q9NPI7 259 aaPredicted RBP15.31■□□□□ 0.04
LDB3-208ENST00000623007 PLCXD1Q9NUJ7 323 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 LRIT1Q9P2V4 623 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 CDC14AQ9UNH5 594 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 WDR45Q9Y484 360 aa15.31■□□□□ 0.04
LDB3-208ENST00000623007 MYOCOSA0A1B0GUC4 107 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 TOX3O15405 576 aaPredicted RBP15.3■□□□□ 0.04
LDB3-208ENST00000623007 ZNF749O43361 778 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms