RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 OR4D1Q15615 310 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SPANXN4Q5MJ08 99 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 LCLAT1Q6UWP7 414 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 DPPA2Q7Z7J5 298 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NAXDQ8IW45 347 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SLC5A8Q8N695 610 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PNPLA1Q8N8W4 532 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 OR56A4Q8NGH8 313 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 RPLP0P6Q8NHW5 317 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PRR7Q8TB68 274 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 KHSRPQ92945 711 aaKnown RBP eCLIP7.51□□□□□ -1.212e-6■■■■□ 20.6
VPS11-209ENST00000622309 C12orf42Q96LP6 360 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 VRK1Q99986 396 aaPredicted RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 SPATA5L1Q9BVQ7 753 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NFKBIZQ9BYH8 718 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 C11orf49Q9H6J7 331 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SPACA1Q9HBV2 294 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NKIRAS2Q9NYR9 191 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 FZD10Q9ULW2 581 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NEUROG3Q9Y4Z2 214 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SPIN1Q9Y657 262 aaPredicted RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MASP2O00187 686 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 EEF1E1O43324 174 aaKnown RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 RAD1O60671 282 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SLC19A2O60779 497 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 STBD1O95210 358 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NFICP08651 508 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NDUFB7P17568 137 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TUBG1P23258 451 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SPAM1P38567 509 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ACTR1AP61163 376 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ATP13A5Q4VNC0 1218 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 RAET1GQ6H3X3 334 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 GSG1LQ6UXU4 331 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TSPAN33Q86UF1 283 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MSRB3Q8IXL7 192 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PUSL1Q8N0Z8 303 aaKnown RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 SYT14Q8NB59 555 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 OR5M9Q8NGP3 310 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 OR9A1PQ8NGU1 263 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 OR10K1Q8NGX5 313 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SPATA22Q8NHS9 363 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 CHTF18Q8WVB6 975 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TCTEX1D2Q8WW35 142 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MS4A3Q96HJ5 214 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 FSD1LQ9BXM9 530 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PRKD2Q9BZL6 878 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ZNF700Q9H0M5 742 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ACTL8Q9H568 366 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TUBG2Q9NRH3 451 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TREM2Q9NZC2 230 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PLEKHA6Q9Y2H5 1048 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MCRIP1C9JLW8 97 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 PHYHO14832 338 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 PRAMEF2O60811 474 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 HPP00738 406 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 HMBSP08397 361 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 ZNF8P17098 575 aaPredicted RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 ITPKAP23677 461 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 AKAP5P24588 427 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 CALCRP30988 508 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 CCR1P32246 355 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 RAB2AP61019 212 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 PDZK1IP1Q13113 114 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 FAM187BQ17R55 369 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 GSG1Q2KHT4 349 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 ZNF674Q2M3X9 581 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 GPRC6AQ5T6X5 926 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 JMJD6Q6NYC1 403 aaPredicted RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 TMEM91Q6ZNR0 172 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 CATSPERGQ6ZRH7 1159 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 Q6ZSR9 355 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 TIPARPQ7Z3E1 657 aaKnown RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 LDB1Q86U70 411 aaPredicted RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 NKAPQ8N5F7 415 aaKnown RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 REPS2Q8NFH8 660 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 STAG3L4Q8TBR4 150 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 RXFP4Q8TDU9 374 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 CPNE4Q96A23 557 aaPredicted RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 IL4I1Q96RQ9 567 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 SPSB2Q99619 263 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 SERHLQ9NQF3 203 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 SLC22A14Q9Y267 594 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 PTCH2Q9Y6C5 1203 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 PLSCR5A0PG75 271 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 WNT9AO14904 365 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 ARPC5O15511 151 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 OIP5O43482 229 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 LANCL1O43813 399 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 MTHFD2P13995 350 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 GABRA1P14867 456 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 RPS2P15880 293 aaKnown RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 S100A7P31151 101 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 ACTR1BP42025 376 aa7.5□□□□□ -1.21
VPS11-209ENST00000622309 RPL38P63173 70 aaKnown RBP7.5□□□□□ -1.21
VPS11-209ENST00000622309 KCNJ10P78508 379 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms