RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 NSMAFQ92636 917 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 TANKQ92844 425 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 NTMT1Q9BV86 223 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SLC6A16Q9GZN6 736 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 TOR3AQ9H497 397 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 COMMD9Q9P000 198 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 DDX60LQ5H9U9 1706 aaKnown RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 PROM1O43490 865 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 BRINP1O60477 761 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 EEDO75530 441 aaKnown RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 UGT2B7P16662 529 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CD36P16671 472 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 NAA10P41227 235 aaPredicted RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 GPR4P46093 362 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SOX2P48431 317 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 GPR143P51810 404 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CLRN1P58418 232 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 RCAN2Q14206 197 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CCSMST1Q4G0I0 132 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 PAGE3Q5JUK9 113 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 LILRA6Q6PI73 481 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 UBALD2Q8IYN6 164 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 OR8K3Q8NH51 312 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 ZUFSPQ96AP4 578 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 RADILQ96JH8 1075 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 TTYH2Q9BSA4 534 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 TXLNGYQ9BZA5 131 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 MTHFD2LQ9H903 347 aaPredicted RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 NKX1-2Q9UD57 310 aaPredicted RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 LAMP5Q9UJQ1 280 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SLC6A14Q9UN76 642 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SNNO75324 88 aaPredicted RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 PPM1BO75688 479 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CSTBP04080 98 aaKnown RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 ITGA5P08648 1049 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 DDCP20711 480 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 ITGB8P26012 769 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 HTR1EP28566 365 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 RPS3AP61247 264 aaKnown RBP8.75□□□□□ -1.01
GGA3-223ENST00000621870 GALK2Q01415 458 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 MEP1AQ16819 746 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 LIN52Q52LA3 116 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CCNJQ5T5M9 372 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 DCAF12Q5T6F0 453 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 ALG1LQ6GMV1 187 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 ADNP2Q6IQ32 1131 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 IL20RBQ6UXL0 311 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 ADAMTSL4Q6UY14 1074 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 FANK1Q8TC84 345 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 SGTBQ96EQ0 304 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 C3orf30Q96M34 536 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 BRF2Q9HAW0 419 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 GNG8Q9UK08 70 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 PADI1Q9ULC6 663 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 PCDHGB5Q9Y5G0 923 aa8.75□□□□□ -1.01
GGA3-223ENST00000621870 CACNA1IQ9P0X4 2223 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 A0A1W2PRQ8 180 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 M0R3H8 397 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 ZNF208O43345 1280 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 ZNF28P17035 718 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 CBX5P45973 191 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 ALDH3A2P51648 485 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 IST1P53990 364 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 OR1D5P58170 312 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 CBX3Q13185 183 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 QPRTQ15274 297 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 IDNKQ5T6J7 187 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 DPY19L2P1Q6NXN4 242 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 TLDC1Q6P9B6 456 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 MARCH9Q86YJ5 346 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 ARL14Q8N4G2 192 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 MINDY1Q8N5J2 469 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PNLDC1Q8NA58 520 aaKnown RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 OR4K5Q8NGD3 323 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 MSLNLQ96KJ4 702 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 MS4A4EQ96PG1 132 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 CCDC106Q9BWC9 280 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 VAPAQ9P0L0 249 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 TBC1D29Q9UFV1 150 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PTBP2Q9UKA9 531 aaKnown RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 CCDC182A6NF36 153 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 ZNF670-ZNF695F2Z2N8 137 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 SEMA3DO95025 777 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 GPR75O95800 540 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 FCER2P06734 321 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 IL12AP29459 219 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 FAUP35544 74 aaKnown RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 SLC19A1P41440 591 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PPP2CBP62714 309 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PPP2CAP67775 309 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 EEF1A2Q05639 463 aaKnown RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 ZNF33BQ06732 778 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PIN1Q13526 163 aaPredicted RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 EXOC3L2Q2M3D2 409 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 RGS21Q2M5E4 152 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 RPS26P11Q5JNZ5 115 aaPredicted RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 OTUD1Q5VV17 481 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms