RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FAM81AQ8TBF8 368 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 RHBDD1Q8TEB9 315 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 C19orf43Q9BQ61 176 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 Q9H521 79 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 MRGBPQ9NV56 204 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 NDUFAF4Q9P032 175 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 BTNL2Q9UIR0 455 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 SAMD4AQ9UPU9 718 aaKnown RBP9.86□□□□□ -0.83
VPS11-208ENST00000621676 ORC6Q9Y5N6 252 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 AKAP13Q12802 2813 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 TGFBR3LH3BV60 316 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 PCDHGA12O60330 932 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 GADD45GO95257 159 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 GPR4P46093 362 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 GZMMP51124 257 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 CCR5P51681 352 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 MAPK14Q16539 360 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 TMEM126BQ8IUX1 230 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 FAM9CQ8IZT9 166 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 TSPEARQ8WU66 669 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 OR5P2Q8WZ92 322 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 WDR45Q9Y484 360 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 ADAMTS9Q9P2N4 1935 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 MAGEA13PA6NCF6 341 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 NPIPB8E9PQR5 432 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 SEMA7AO75326 666 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ERGP11308 486 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 PORP16435 677 aaPredicted RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 ABATP80404 500 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 AHSA2Q719I0 299 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 OR1L3Q8NH93 324 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 RIT1Q92963 219 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 TBC1D20Q96BZ9 403 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ART5Q96L15 291 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 DOHHQ9BU89 302 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 NAA50Q9GZZ1 169 aaKnown RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 OCIAD1Q9NX40 245 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ATP6V1HQ9UI12 483 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 IGHV1OR21-1A0A087WYE8 117 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 CD1CP29017 333 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 MAP2K4P45985 399 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 CAPZBP47756 277 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 MAN2A2P49641 1150 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 SELENOWP63302 87 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 KCNJ10P78508 379 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 MVKQ03426 396 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 EPS8Q12929 822 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 DAG1Q14118 895 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 COL19A1Q14993 1142 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 PLK5Q496M5 336 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 IGFN1Q86VF2 1251 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 GPR32P1Q8NGA4 272 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 KLHL6Q8WZ60 621 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 DUSP15Q9H1R2 295 aaPredicted RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 PRTFDC1Q9NRG1 225 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 DNAJB9Q9UBS3 223 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 SLC9A8Q9Y2E8 581 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 GMPPBQ9Y5P6 360 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 LYVE1Q9Y5Y7 322 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 SPACA6W5XKT8 324 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 DYTNA2CJ06 578 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 A8MVJ9 347 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 TNFRSF21O75509 655 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 IFNW1P05000 195 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 RGS8P57771 180 aaPredicted RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 ZXDAP98168 799 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 TEAD4Q15561 434 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ATP6AP1Q15904 470 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 IFI44LQ53G44 452 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ATAD3BQ5T9A4 648 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 CPZQ66K79 652 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 METTL2BQ6P1Q9 378 aaKnown RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 RBM44Q6ZP01 1051 aaKnown RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 PTRH1Q86Y79 214 aaKnown RBP9.85□□□□□ -0.83
VPS11-208ENST00000621676 C10orf53Q8N6V4 93 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 ZNF555Q8NEP9 628 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 TSPAN14Q8NG11 270 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 OR51L1Q8NGJ5 315 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 GAL3ST3Q96A11 431 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 KLHDC3Q9BQ90 382 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 POLR1BQ9H9Y6 1135 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 C3orf14Q9HBI5 128 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 POMT2Q9UKY4 750 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 MAN2B2Q9Y2E5 1009 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 NBEAQ8NFP9 2946 aa9.85□□□□□ -0.83
VPS11-208ENST00000621676 A0A1W2PQM1 296 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 URADA6NGE7 173 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FAM220BPB1ANY3 271 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FOXS1O43638 330 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 GASTP01350 101 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ITPKBP27987 946 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 GCKP35557 465 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 TAS2R41P59536 307 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 PRR5P85299 388 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 NADK2Q4G0N4 442 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 GPR107Q5VW38 600 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ST13P4Q8IZP2 240 aaPredicted RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 SYNPOQ8N3V7 929 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 SRFBP1Q8NEF9 429 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms