RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SH2B3Q9UQQ2 575 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 NAALAD2Q9Y3Q0 740 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 NWD2Q9ULI1 1742 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MYH13Q9UKX3 1938 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ADAMTSL3P82987 1691 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 DRGXA6NNA5 263 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 EIF3FO00303 357 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ANXA3P12429 323 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 HOXD8P13378 290 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 THBS2P35442 1172 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 XCR1P46094 333 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TLE3Q04726 772 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF33BQ06732 778 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 CTC1Q2NKJ3 1217 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF554Q86TJ5 538 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 CBARPQ8N350 705 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MDGA1Q8NFP4 955 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TSPEARQ8WU66 669 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 FUBP1Q96AE4 644 aaKnown RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 HHIPL1Q96JK4 782 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF778Q96MU6 729 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 RBM24Q9BX46 236 aaKnown RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 DNTTIP1Q9H147 329 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 GSKIPQ9P0R6 139 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TRIM64BA6NI03 449 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 APOL3O95236 402 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 S100A6P06703 90 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 RHCEP18577 417 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 GCH1P30793 250 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 CD68P34810 354 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 RHDQ02161 417 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 FAM46AQ96IP4 442 aaKnown RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ICKQ9UPZ9 632 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 VDAC3Q9Y277 283 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF829Q3KNS6 432 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF551Q7Z340 670 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SLC41A3Q96GZ6 507 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SOX17Q9H6I2 414 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 RDH8Q9NYR8 311 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 NSG1A0A0A6YYJ2 146 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 AQP9O43315 295 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 HK3P52790 923 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CLDN8P56748 225 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CTBSQ01459 385 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 TRAM1Q15629 374 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 PRAMEF8Q5VWM4 474 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 PRAMEF7Q5VXH5 474 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 STEAP4Q687X5 459 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SLC18B1Q6NT16 456 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 GALNT6Q8NCL4 622 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CIDECQ96AQ7 238 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM19Q96HH6 336 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 FIZ1Q96SL8 496 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 PCTPQ9UKL6 214 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ADAM12O43184 909 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 NDUFV2P19404 249 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 DMWDQ09019 674 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 C6orf132Q5T0Z8 1188 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM53Q6P2H8 277 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 EDAQ92838 391 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 APIPQ96GX9 242 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 FUZQ9BT04 418 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SLC6A15Q9H2J7 730 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF442Q9H7R0 627 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SLAMF7Q9NQ25 335 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SCP2D1Q9UJQ7 156 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 RNF6Q9Y252 685 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 SPEF1Q9Y4P9 236 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 A0A1W2PPK0 400 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 PHYHO14832 338 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 PABPC4LP0CB38 370 aaKnown RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ETFAP13804 333 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ACVR1BP36896 505 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CDH15P55291 814 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 GSCP56915 257 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CLDN10P78369 228 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 MPP7Q5T2T1 576 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 RELL1Q8IUW5 271 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 TDHQ8IZJ6 230 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF619Q8N2I2 560 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 DEFB123Q8N688 67 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CNEP1R1Q8N9A8 125 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CASTOR1Q8WTX7 329 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF700Q9H0M5 742 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 KCNIP1Q9NZI2 227 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 NENFQ9UMX5 172 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 KDM3BQ7LBC6 1761 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CDC14CA4D256 554 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 DPPA5A6NC42 116 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 FMO6PO60774 539 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 OXSR1O95747 527 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 MAGEA2P43356 314 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 CSNK1EP49674 416 aaKnown RBP10.8□□□□□ -0.68
CLIP1-219ENST00000620786 FXYD6P3P58550 94 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ACTA2P62736 377 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ACTG2P63267 376 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 ZXDBP98169 803 aa10.8□□□□□ -0.68
CLIP1-219ENST00000620786 MELKQ14680 651 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms