RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PRPS1L1P21108 318 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 TACR1P25103 407 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 PPP2R1BP30154 601 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 RAP1GDS1P52306 607 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 RAE1P78406 368 aaKnown RBP14.96□□□□□ -0.02
CD40-207ENST00000620709 HSF1Q00613 529 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 KRTCAP3Q53RY4 240 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 DEPDC1Q5TB30 811 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 TRIM40Q6P9F5 258 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 COMMD6Q7Z4G1 85 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 RETREG3Q86VR2 466 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 SCUBE1Q8IWY4 988 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 NFAM1Q8NET5 270 aaPredicted RBP14.96□□□□□ -0.02
CD40-207ENST00000620709 REXO4Q9GZR2 422 aaKnown RBP14.96□□□□□ -0.02
CD40-207ENST00000620709 GID8Q9NWU2 228 aa14.96□□□□□ -0.02
CD40-207ENST00000620709 GNG14A0A1W2PPG7 69 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 NME2P1O60361 137 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 IFNA16P05015 189 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 ANXA4P09525 319 aaPredicted RBP14.95□□□□□ -0.02
CD40-207ENST00000620709 ZNF24P17028 368 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 NME2P22392 152 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 CERS1P27544 350 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 RFC3P40938 356 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 HLCSP50747 726 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 CLCN2P51788 898 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 HNRNPFP52597 415 aaKnown RBP14.95□□□□□ -0.02
CD40-207ENST00000620709 RAB38P57729 211 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 C21orf58P58505 322 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 ZNF763Q0D2J5 394 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 DPY19L1Q2PZI1 675 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 FAM174BQ3ZCQ3 159 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 BNC2Q6ZN30 1099 aaPredicted RBP14.95□□□□□ -0.02
CD40-207ENST00000620709 PAGE2Q7Z2X7 111 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 SPPL2CQ8IUH8 684 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 ULK2Q8IYT8 1036 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 ZNF808Q8N4W9 903 aaPredicted RBP14.95□□□□□ -0.02
CD40-207ENST00000620709 TMEM156Q8N614 296 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 KRTCAP2Q8N6L1 136 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 TMEM52Q8NDY8 209 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 B3GNT7Q8NFL0 401 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 VPS33AQ96AX1 596 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 TESCQ96BS2 214 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 F2RL3Q96RI0 385 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 NPLQ9BXD5 320 aaPredicted RBP14.95□□□□□ -0.02
CD40-207ENST00000620709 MCM8Q9UJA3 840 aa14.95□□□□□ -0.02
CD40-207ENST00000620709 MRPS33Q9Y291 106 aaKnown RBP14.95□□□□□ -0.02
CD40-207ENST00000620709 ASPDHA6ND91 283 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 SAP18O00422 153 aaKnown RBP14.94□□□□□ -0.02
CD40-207ENST00000620709 ASNA1O43681 348 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 TBX6O95947 436 aaPredicted RBP14.94□□□□□ -0.02
CD40-207ENST00000620709 HTR1EP28566 365 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 ELF3P78545 371 aaPredicted RBP14.94□□□□□ -0.02
CD40-207ENST00000620709 TGM3Q08188 693 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 TMEM35AQ53FP2 167 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 SPANXN4Q5MJ08 99 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 RPTNQ6XPR3 784 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 RIMKLAQ8IXN7 391 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 FAM13CQ8NE31 585 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 OR2L5Q8NG80 312 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 NCLNQ969V3 563 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 EGLN2Q96KS0 407 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 QRFPRQ96P65 431 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 SERINC2Q96SA4 455 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 RUBCNLQ9H714 662 aa14.94□□□□□ -0.02
CD40-207ENST00000620709 LIN28AQ9H9Z2 209 aaKnown RBP14.94□□□□□ -0.02
CD40-207ENST00000620709 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.94□□□□□ -0.02
CD40-207ENST00000620709 TGFBR3LH3BV60 316 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 PLPP1O14494 284 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 CIB2O75838 187 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 NPPAP01160 153 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 PGRP06401 933 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 PRF1P14222 555 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 TNNI3P19429 210 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 S100A3P33764 101 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 MEOX1P50221 254 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 DGKQP52824 942 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 MTTPP55157 894 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 HSD17B7P56937 341 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 PSME3P61289 254 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 NFYCQ13952 458 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 TRMT5Q32P41 509 aaKnown RBP14.93□□□□□ -0.02
CD40-207ENST00000620709 C8orf82Q6P1X6 216 aaPredicted RBP14.93□□□□□ -0.02
CD40-207ENST00000620709 MCEMP1Q8IX19 187 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 CYP4Z2PQ8N1L4 340 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 GHDCQ8N2G8 530 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 DPP10Q8N608 796 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 APCDD1LQ8NCL9 501 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 CDC26Q8NHZ8 85 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 RGMAQ96B86 450 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 VMP1Q96GC9 406 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 CLPTM1LQ96KA5 538 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 CSF3RQ99062 836 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 HOPXQ9BPY8 73 aaPredicted RBP14.93□□□□□ -0.02
CD40-207ENST00000620709 ERVK-11Q9UQG0 969 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 KLF13Q9Y2Y9 288 aaPredicted RBP14.93□□□□□ -0.02
CD40-207ENST00000620709 PCNX1Q96RV3 2341 aa14.93□□□□□ -0.02
CD40-207ENST00000620709 ENO4A6NNW6 628 aa14.92□□□□□ -0.02
CD40-207ENST00000620709 TFECO14948 347 aaPredicted RBP14.92□□□□□ -0.02
CD40-207ENST00000620709 CDC40O60508 579 aaKnown RBP eCLIP14.92□□□□□ -0.02
CD40-207ENST00000620709 ITGA10O75578 1167 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms