RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 BBS10Q8TAM1 723 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 XAGE5Q8WWM1 108 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 GCDHQ92947 438 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 ARMC5Q96C12 935 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 LRRC46Q96FV0 321 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 HTATIP2Q9BUP3 242 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 TEX10Q9NXF1 929 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 SEC14L3Q9UDX4 400 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 CEP290O15078 2479 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 PARP14Q460N5 1801 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 HEPACAM2A8MVW5 462 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 SGCEO43556 437 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 KCNE1P15382 129 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZP3P21754 424 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 PITPNBP48739 271 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 VEGFBP49765 207 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZNF177Q13360 481 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 COL9A2Q14055 689 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 LINGO2Q7L985 606 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 TSEN54Q7Z6J9 526 aaKnown RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 SYT9Q86SS6 491 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 PPCDCQ96CD2 204 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 SENP5Q96HI0 755 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 ATF6BQ99941 703 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 HEXA-AS1Q9H8Q6 139 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 SLC39A1Q9NY26 324 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 SCP2D1Q9UJQ7 156 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 PCDHB1Q9Y5F3 818 aa9.26□□□□□ -0.93
TNFAIP3-210ENST00000620204 A0A0B4J203 849 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 A0A1B0GVM2 712 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 RAB19A4D1S5 217 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 OR6C75A6NL08 312 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 KRBOX1C9JBD0 128 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 KHNYNO15037 678 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 TGFB1P01137 390 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 HPXP02790 462 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 PPIBP23284 216 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ITGB7P26010 798 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 SHC1P29353 583 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 MTNR1AP48039 350 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CRYBA2P53672 197 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CDH11P55287 796 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 LSM11P83369 360 aaKnown RBP eCLIP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CAMK2DQ13557 499 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 DOC2AQ14183 400 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 MANEALQ5VSG8 457 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ACSM5Q6NUN0 579 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 HAGHLQ6PII5 290 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 SMARCD3Q6STE5 483 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 DGLUCYQ7Z3D6 616 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 MON1AQ86VX9 555 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 KLHDC9Q8NEP7 349 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 KIAA1143Q96AT1 154 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 TBC1D20Q96BZ9 403 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 NPAS1Q99742 590 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 THSD1Q9NS62 852 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CFAP97Q9P2B7 532 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CORO2BQ9UQ03 480 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 RUVBL1Q9Y265 456 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 OR10H1Q9Y4A9 318 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZFP37Q9Y6Q3 630 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 SMIM35A0A1B0GVV1 85 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZNF197O14709 1029 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 TO15178 435 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CLDN7O95471 211 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 INHAP05111 366 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 PAICSP22234 425 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 SLC6A1P30531 599 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 BUD31P41223 144 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CTAG1AP78358 180 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CAP1Q01518 475 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 SEC23BQ15437 767 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CHRNA6Q15825 494 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ANXA8L1Q5VT79 327 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 CEACAM20Q6UY09 585 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 TMEM91Q6ZNR0 172 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 PDZD9Q8IXQ8 264 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 OR51G2Q8NGK0 314 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 NANPQ8TBE9 248 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 TEX47Q8TBZ9 253 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 PXYLP1Q8TE99 480 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ADAM2Q99965 735 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 DLL4Q9NR61 685 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 MRTO4Q9UKD2 239 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 SLC13A4Q9UKG4 626 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 ANXA2P2A6NMY6 339 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 DISC1C4P0D8 188 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 EIF4EP06730 217 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 VEGFCP49767 419 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 MVDP53602 400 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 OR10A3P58181 314 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 MRPS6P82932 125 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 TAF10Q12962 218 aa9.25□□□□□ -0.93
TNFAIP3-210ENST00000620204 FAM209BQ5JX69 171 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms