RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PDX1P52945 283 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TPD52P55327 224 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 NNATQ16517 81 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TTLL10Q6ZVT0 673 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 MAML2Q8IZL2 1156 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 ST13P4Q8IZP2 240 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 DNAJC22Q8N4W6 341 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TSPAN14Q8NG11 270 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ZFP28Q8NHY6 868 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CNIH3Q8TBE1 160 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 LZICQ8WZA0 190 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CLIP3Q96DZ5 547 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 RMND5BQ96G75 393 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 ZNF300Q96RE9 604 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 ANKHQ9HCJ1 492 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 RASSF1Q9NS23 344 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 KIF17Q9P2E2 1029 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 NDOR1Q9UHB4 597 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 NTNG1Q9Y2I2 539 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 LYVE1Q9Y5Y7 322 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 LOC100130705A0A1B0GUX0 176 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 H3BNH8 94 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 EMC8O43402 210 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ZBTB11O95625 1053 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 FHP07954 510 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 PORP16435 677 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 CSF2RBP32927 897 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 TSFMP43897 325 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 ARHGDIAP52565 204 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 RAPSNQ13702 412 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 MLC1Q15049 377 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 CTU2Q2VPK5 515 aaKnown RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 KLHL17Q6TDP4 642 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SVOPLQ8N434 492 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SLC5A8Q8N695 610 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 ELF4Q99607 663 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 RHNO1Q9BSD3 238 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SPATA9Q9BWV2 254 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 YIPF3Q9GZM5 350 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 A4GALTQ9NPC4 353 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 P2RX2Q9UBL9 471 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 SLC6A14Q9UN76 642 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 MYRFQ9Y2G1 1151 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 PADI2Q9Y2J8 665 aa7.3□□□□□ -1.24
NEK3-207ENST00000617054 GPR55Q9Y2T6 319 aaPredicted RBP7.3□□□□□ -1.24
NEK3-207ENST00000617054 TP53BP1Q12888 1972 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 IGHV1OR21-1A0A087WYE8 117 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 TRBV4-1A0A0J9YWV2 114 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 HYKKA2RU49 373 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 PTGES3LE9PB15 166 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 LAMTOR5O43504 91 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 GDF9O60383 454 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 IGFBP1P08833 259 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 FOLR1P15328 257 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 CD247P20963 164 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 ITGA1P56199 1179 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 PRR5P85299 388 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 SMN1Q16637 294 aaKnown RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 DUSP5Q16690 384 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 C1orf189Q5VU69 101 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 KLHL35Q6PF15 583 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 FIGNL1Q6PIW4 674 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 SHISA6Q6ZSJ9 500 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 CCDC80Q76M96 950 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 HIPK1Q86Z02 1210 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 ADAMTS15Q8TE58 950 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 ATOH1Q92858 354 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 ANKRD9Q96BM1 317 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 MYCBPQ99417 103 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 ING2Q9H160 280 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 RAD21L1Q9H4I0 556 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 C3orf14Q9HBI5 128 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 PNPLA3Q9NST1 481 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 ACER3Q9NUN7 267 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 GIN1Q9NXP7 522 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 PHF11Q9UIL8 331 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 A8MUA0 341 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 TMEM150CB9EJG8 249 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 FPR1P21462 350 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 EEF1B2P24534 225 aaKnown RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 CTSKP43235 329 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 CLK3P49761 638 aaKnown RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 PGDP52209 483 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 GPR68Q15743 365 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 HLA-BQ31612 363 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 NADK2Q4G0N4 442 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 FGD3Q5JSP0 725 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 MFSD4BQ5TF39 518 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 TMEM236Q5W0B7 351 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 TCTN3Q6NUS6 607 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 GUSBP11Q6P575 273 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 OGFOD3Q6PK18 319 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 PATL1Q86TB9 770 aaKnown RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 C11orf74Q86VG3 221 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 C17orf82Q86X59 251 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 RBM12BQ8IXT5 1001 aaKnown RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 ARHGEF39Q8N4T4 335 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 OR4N2Q8NGD1 307 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 OR6T1Q8NGN1 323 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms