RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ALAS2P22557 587 aa8.29□□□□□ -1.08
PDE6A-204ENST00000613228 FAUP35544 74 aaKnown RBP8.29□□□□□ -1.08
PDE6A-204ENST00000613228 FEN1P39748 380 aaKnown RBP8.29□□□□□ -1.08
PDE6A-204ENST00000613228 HNRNPKP61978 463 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDE6A-204ENST00000613228 SNRPD2P62316 118 aaKnown RBP8.29□□□□□ -1.08
PDE6A-204ENST00000613228 POU6F2P78424 691 aaPredicted RBP8.29□□□□□ -1.08
PDE6A-204ENST00000613228 SH2D5Q6ZV89 423 aa8.29□□□□□ -1.08
PDE6A-204ENST00000613228 FAM217AQ8IXS0 508 aa8.29□□□□□ -1.08
PDE6A-204ENST00000613228 UFD1Q92890 307 aa8.29□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF578Q96N58 590 aaPredicted RBP8.29□□□□□ -1.08
PDE6A-204ENST00000613228 TMEM30AQ9NV96 361 aa8.29□□□□□ -1.08
PDE6A-204ENST00000613228 HRASLS2Q9NWW9 162 aa8.29□□□□□ -1.08
PDE6A-204ENST00000613228 TCRBV3S1A0A5B6 114 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 THEGLP0DJG4 465 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 NR2C1P13056 603 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PTGR1Q14914 329 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HENMT1Q5T8I9 393 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 UBQLNLQ8IYU4 475 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZFP90Q8TF47 636 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ARRDC3Q96B67 414 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 SGK3Q96BR1 496 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TAPBPLQ9BX59 468 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 BEX2Q9BXY8 128 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF436Q9C0F3 470 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HOXD1Q9GZZ0 328 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PRELID3BQ9Y3B1 194 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PCDHGB6Q9Y5F9 930 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HS3ST3A1Q9Y663 406 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 A0A0J9YY10 115 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 OR6C74A6NCV1 312 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 H3BUI4 141 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 BCAS1O75363 584 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 CAPN3P20807 821 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TSFMP43897 325 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TAS2R38P59533 333 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 SLAMF1Q13291 335 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 COMMD6Q7Z4G1 85 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 RETREG3Q86VR2 466 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 UBE2J2Q8N2K1 259 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ARL6IP6Q8N6S5 226 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 OR52E4Q8NGH9 312 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 THRSPQ92748 146 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TANKQ92844 425 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 GPR78Q96P69 363 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 EXOSC1Q9Y3B2 195 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PRKAB1Q9Y478 270 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 SPIN1Q9Y657 262 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 CFAP20Q9Y6A4 193 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PDCD5O14737 125 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 FZD6O60353 706 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 SLC16A8O95907 504 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HLA-DQA2P01906 255 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 JUNP05412 331 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HTR2AP28223 471 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TEAD1P28347 426 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PCSK6P29122 969 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 P2RY2P41231 377 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 MAP2K3P46734 347 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 SLC6A11P48066 632 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 KIAA0895LQ68EN5 471 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF683Q8IZ20 524 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 KLHL36Q8N4N3 616 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 OR52J3Q8NH60 311 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 GTPBP3Q969Y2 492 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PRR11Q96HE9 360 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF597Q96LX8 424 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ACPTQ9BZG2 426 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 NIPAL2Q9H841 368 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TAS2R3Q9NYW6 316 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PPIEQ9UNP9 301 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 AGAP5A6NIR3 686 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 C9J4A7 227 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 NME4O00746 187 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HMGB3O15347 200 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 REM1O75628 298 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 RNH1P13489 461 aaKnown RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 HTR6P50406 440 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 RAB5CP51148 216 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 EPHA5P54756 1037 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PSPHP78330 225 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 PITPNAQ00169 270 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 CDC20Q12834 499 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 C18orf21Q32NC0 220 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZCCHC12Q6PEW1 402 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 MFSD9Q8NBP5 474 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 OR5AK3PQ8NH89 298 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ZFPM2Q8WW38 1151 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 ASB16Q96NS5 453 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 LHPPQ9H008 270 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 GTF2A1LQ9UNN4 478 aa8.28□□□□□ -1.08
PDE6A-204ENST00000613228 TTLL8A6PVC2 850 aa8.27□□□□□ -1.08
PDE6A-204ENST00000613228 TEX46H3BTG2 121 aa8.27□□□□□ -1.08
PDE6A-204ENST00000613228 SCDO00767 359 aa8.27□□□□□ -1.08
PDE6A-204ENST00000613228 RGS13O14921 159 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms