RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	MAN2C1	Q9NTJ4	1040 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SLC9A8	Q9Y2E8	581 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	RNF215	Q9Y6U7	377 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130		A0A0A6YYJ9	748 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	EFCAB14	O75071	495 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	NCR1	O76036	304 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	ABLIM3	O94929	683 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	CELF2	O95319	508 aa	Known RBP	12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	DHFR	P00374	187 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	OR12D1	P0DN82	309 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	STOM	P27105	288 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SOX18	P35713	384 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	CTSC	P53634	463 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	MANF	P55145	182 aa	Known RBP	12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	CTBP2	P56545	445 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	TAP2	Q03519	686 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	FCN2	Q15485	313 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	COL28A1	Q2UY09	1125 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	HACD4	Q5VWC8	232 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	FAM205BP	Q63HN1	556 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	TPGS2	Q68CL5	300 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SDE2	Q6IQ49	451 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	C6orf120	Q7Z4R8	191 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	GLRX5	Q86SX6	157 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	FAM20C	Q8IXL6	584 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	ZFP41	Q8N8Y5	198 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	ZNF680	Q8NEM1	530 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	OR52N1	Q8NH53	320 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	ZNF461	Q8TAF7	563 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SLC9A6	Q92581	669 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	RAB8B	Q92930	207 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	PHF21A	Q96BD5	680 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	OMA1	Q96E52	524 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SCMH1	Q96GD3	660 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	WFDC6	Q9BQY6	131 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	TMED9	Q9BVK6	235 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	PRR14	Q9BWN1	585 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	BTBD1	Q9H0C5	482 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	HDHD2	Q9H0R4	259 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SPNS1	Q9H2V7	528 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	C11orf49	Q9H6J7	331 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	P2RX2	Q9UBL9	471 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	EXTL2	Q9UBQ6	330 aa		12.97	□□□□□ -0.33
UBE2F-223	ENST00000612130	SHISA3	A0PJX4	238 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	HOXA2	O43364	376 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	SLC28A2	O43868	658 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	TSC22D2	O75157	780 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	EFEMP2	O95967	443 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	LALBA	P00709	142 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	RAF1	P04049	648 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	ANXA3	P12429	323 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	SLC6A11	P48066	632 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	CSTF1	Q05048	431 aa	Known RBP	12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	SPDYE7P	Q495Y7	208 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	BRAT1	Q6PJG6	821 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	GDPD4	Q6W3E5	623 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	SLC9B2	Q86UD5	537 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	LRRC28	Q86X40	367 aa	Predicted RBP	12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	KIF18B	Q86Y91	864 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	NPAS4	Q8IUM7	802 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	KLHL36	Q8N4N3	616 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	SMPDL3A	Q92484	453 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	RFK	Q969G6	155 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	RFT1	Q96AA3	541 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	GPA33	Q99795	319 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	TREX2	Q9BQ50	279 aa	Predicted RBP	12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	PLA2G12A	Q9BZM1	189 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	PPIL3	Q9H2H8	161 aa	Known RBP	12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	TBC1D17	Q9HA65	648 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	ZFP64	Q9NPA5	681 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	AHSP	Q9NZD4	102 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	MOSPD1	Q9UJG1	213 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130	LRFN2	Q9ULH4	789 aa		12.96	□□□□□ -0.33
UBE2F-223	ENST00000612130		M0R3H8	397 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	UROD	P06132	367 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	ELK1	P19419	428 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	CD79B	P40259	229 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	FRK	P42685	505 aa	Predicted RBP	12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	ACLY	P53396	1101 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	CCL23	P55773	120 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	TAGLN	Q01995	201 aa	Known RBP	12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF284	Q2VY69	593 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	HSD17B12	Q53GQ0	312 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	CD276	Q5ZPR3	534 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130		Q6ZVL8	140 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	ADGRF3	Q8IZF5	1079 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	FBXL6	Q8N531	539 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	OR5M3	Q8NGP4	307 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF764	Q96H86	408 aa	Predicted RBP	12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	DOCK6	Q96HP0	2047 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	LMLN	Q96KR4	655 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	RIOK2	Q9BVS4	552 aa	Known RBP	12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	SAP130	Q9H0E3	1048 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	GHITM	Q9H3K2	345 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	CYSLTR2	Q9NS75	346 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	SLC25A13	Q9UJS0	675 aa		12.95	□□□□□ -0.34
UBE2F-223	ENST00000612130	MGAT4A	Q9UM21	535 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms