RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 REV1Q9UBZ9 1251 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 DAPP1Q9UN19 280 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 KNL1Q8NG31 2342 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 SH3PXD2BA1X283 911 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 H0YGG7 62 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 CASC3O15234 703 aaKnown RBP12.79□□□□□ -0.36
NEK3-205ENST00000610828 SLC22A1O15245 554 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 STSP08842 583 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 CD36P16671 472 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ZNF10P21506 573 aaPredicted RBP12.79□□□□□ -0.36
NEK3-205ENST00000610828 LSSP48449 732 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 MAN2A2P49641 1150 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ARF3P61204 181 aaPredicted RBP12.79□□□□□ -0.36
NEK3-205ENST00000610828 TEKQ02763 1124 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 CHRNEQ04844 493 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ST3GAL4Q11206 333 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 SYT16Q17RD7 645 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ZNF311Q5JNZ3 666 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 TMEFF1Q8IYR6 380 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 OR4K14Q8NGD5 310 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 NDNFQ8TB73 568 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ADAMTS15Q8TE58 950 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 GIMAP5Q96F15 307 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 PINK1Q9BXM7 581 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ITPAQ9BY32 194 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ACTRT3Q9BYD9 372 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 TWSG1Q9GZX9 223 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 TMEM74BQ9NUR3 256 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 FKBP14Q9NWM8 211 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 A0A1W2PRQ8 180 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 TOR1BO14657 336 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 ASNA1O43681 348 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 MPZL2O60487 215 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 CTSEP14091 401 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 GLULP15104 373 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 ALOX12P18054 663 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 MLLT10P55197 1068 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 UBE2IP63279 158 aaKnown RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 EIF2B5Q13144 721 aaKnown RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 ILKQ13418 452 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 C1orf61Q13536 156 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 COL19A1Q14993 1142 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 TBCEQ15813 527 aaPredicted RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 MOGQ16653 247 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 EGFL6Q8IUX8 553 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 CROCCP3Q8IVE0 287 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 FAM46DQ8NEK8 389 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 B3GNT7Q8NFL0 401 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 ZFPM2Q8WW38 1151 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 SLC9A6Q92581 669 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 FCGR1BQ92637 280 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 IL4I1Q96RQ9 567 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 SLC13A4Q9UKG4 626 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 LIPT1Q9Y234 373 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 MRPS2Q9Y399 296 aaKnown RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 ENTPD2Q9Y5L3 495 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 hCG_2014768A0A024R1R8 64 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 M0R3G1 203 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 TLR4O00206 839 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 FRS3O43559 492 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 ALPPP05187 535 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 ID2Q02363 134 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 PRAMEF8Q5VWM4 474 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 PRAMEF7Q5VXH5 474 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 PRSS41Q7RTY9 318 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 VRK2Q86Y07 508 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 SAMD14Q8IZD0 417 aaPredicted RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 SLC16A11Q8NCK7 471 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 SIMC1Q8NDZ2 872 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 BAHD1Q8TBE0 780 aaPredicted RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 PRRC1Q96M27 445 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 TRNT1Q96Q11 434 aaKnown RBP12.78□□□□□ -0.36
NEK3-205ENST00000610828 FUZQ9BT04 418 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 NECTIN3Q9NQS3 549 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 CLN6Q9NWW5 311 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 SLC22A7Q9Y694 548 aa12.78□□□□□ -0.36
NEK3-205ENST00000610828 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.36
NEK3-205ENST00000610828 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 A0A0G2JNG1 304 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 KIR2DS3K7RE56 304 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 INHBBP09529 407 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 TNNI3P19429 210 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 TGFBR2P37173 567 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 CCR5P51681 352 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 BMXP51813 675 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 PPP1CAP62136 330 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 NCS1P62166 190 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.366e-7■□□□□ 10.5
NEK3-205ENST00000610828 FZD2Q14332 565 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 KIR2DS5Q14953 304 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 TIGD6Q17RP2 521 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 ZNF829Q3KNS6 432 aaPredicted RBP12.77□□□□□ -0.36
NEK3-205ENST00000610828 ZNF438Q7Z4V0 828 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms